| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3175 |
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| Symbol | |
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| ID | 5324054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3338189 |
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| End bp | 3339232 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792123 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001328834 |
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| Protein GI | 150398367 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGG AGCGGGTCAC GGTTGTCGAC ATTGCGCGTG CCGCCGGCGT GTCGAAATCG
ACCGTGTCGC TCGTCCTGCA GGGAAGTCCG CTCGTCAATG AAGCGACGCG GGCAAAGGTC
AATGCGGCGA TCCGCGAGCT TGGCTATGTC TATAATCGCA GCGCCGCCAA TCTGCGCCAG
GCGAGATCGA AGATCATCGG CATCGTCGTC AACGATCTCA CGAACAGTTT CTTTGCGGAG
CTCGCGGTCG GCGTCGACGA GGTCGTGCAG TCCGCCGGCT TCGTGCAGTT TCTCGCCAAT
ACCAGCGAGA AGCTGGAGCG CCAGCGTGAG GTCATCGCCT CTATGCGCGA GCACGGCGTG
TCGGGCCTCA TCATATCGCC GGCGCGCGGC ACGGAAGTCG GCGATCTCGC ACCGCTCGGC
GCCGCCGGGA TTCCGGTTGT ACTCGTCGTG CGCGACATTC CCGGAGCCGA TGTGTCGTCG
CTGATATCAG ACAATCACGC TGGCGCCGTT GCCGCCGTGC GGCATCTGGT CGAGCGCGGC
CATCGCCGCG TGGCCTTCCT GGGCGGCTTT GCCGATACAG CGGTTTTCGA AGCGCGAATG
CGCGGCTATC GCGATGCCTT GCAAGAGGCG GGTCTGGATA CCTCCGAGAC TCTGACCATC
GGCTCGGCGC CGTCTCGCGC CGGCGGTGTC ACGGCAATAG AGCAGGCGAT GATGCTGAAG
GAGCGGCCGA CCGCGGCGCT CTGCTTCAAC GATGCCGTCG CCTTCGGTGT CTGCGACGGC
TTGCGCGCGC GTCGGCTGGA GCCCGGCGAA GACTTCGCGG TGATCGGTTT CGACGACGTG
ATCGAAGCGA AAACCGCGGT GCCGGCGCTG ACCACGGTCT CTGTCGATCC GCAGGGCATG
GGCGAGCGGG CGGCGGAGCT GCTTCTGAAA CAGATCAATA GCGGCCGTGT CGAGCCGGAA
GCGATCGTCA GCCCGGTACG GCTCGCCATC CGCCAGAGCT GCGGCGCAGC CGTCGGACGC
AGGATGAAGG AGATTTCGTC ATGA
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| Protein sequence | MGKERVTVVD IARAAGVSKS TVSLVLQGSP LVNEATRAKV NAAIRELGYV YNRSAANLRQ
ARSKIIGIVV NDLTNSFFAE LAVGVDEVVQ SAGFVQFLAN TSEKLERQRE VIASMREHGV
SGLIISPARG TEVGDLAPLG AAGIPVVLVV RDIPGADVSS LISDNHAGAV AAVRHLVERG
HRRVAFLGGF ADTAVFEARM RGYRDALQEA GLDTSETLTI GSAPSRAGGV TAIEQAMMLK
ERPTAALCFN DAVAFGVCDG LRARRLEPGE DFAVIGFDDV IEAKTAVPAL TTVSVDPQGM
GERAAELLLK QINSGRVEPE AIVSPVRLAI RQSCGAAVGR RMKEISS
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