Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3171 |
Symbol | |
ID | 5324050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3333287 |
End bp | 3334795 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640792119 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001328830 |
Protein GI | 150398363 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTAC TCGTAAGGCC GAAGGCGCTC GGCGAATACA AGGTCCGTGA ATTCCGAATG CTGATCGACG GCCAGTGGGT CGATAGCGCC GAGGGCCGGA CGATCGAGCG CGTGGCACCC GGGCACGGCG TCGTCGTCAG CCGCTATCAG GCCGCTACGA AGGTCGATGC CGAGCGGGCG ATCGCCGCGG CGCGGCGCGC CTTCGACCAG GGCCCATGGC CGCGCATGAC CGCCGCGGAG AGATCGCTGA TCCTGCTCAA GGTCGCCGAC ATGGTCGCGG CGCGCGCGGA TGAACTCGCC TTTCTCGACG CGGTCGAATC CGGCAAGCCG ATCAGCCAGG CAAAAGGCGA ACTGGCCGGT GCCGCCGACA TCTGGCGCTA TGCTGCGGCA CTTGCCCGCG ATCTCTCCGG CGAAAGCTAC AACACGCTCG GGGAGGGGAC GCTCGGCGTG GTGCTGCGCG AGCCGATCGG TGTCGTTTCA ATCATCACGC CCTGGAATTT CCCTTTCCTG ATCGTAAGCC AGAAGCTCCC CTTTGCACTC GCCGCCGGCT GCACGACCGT GGTGAAACCG TCGGAGCTCA CCTCCGCCTC GACGCTGGTG CTCGGCGAGA TCCTGGAAGC TGCAGGCGTG CCCGCAGGCG CCGTGAACAT CATCGTCGGC ACGGGACCGG AGGCCGGCGC CCCGCTCACG ACGCACCCGC ATGTCGACAT GGTCTCCTTC ACGGGCTCCA CCGGCATTGG CAGGCTGACC ATGGCGAATG CGGCGCAGAC CCTGAAAAAA GTCTCGCTGG AACTCGGCGG CAAGAACCCG CAGATCGTCT TTCCGGACGC CAATCTGGAT GAATTCATCG ATGCGGCCGT CTTTGGTGCC TATTTCAATG CCGGCGAATG CTGCAATGCC GGCTCACGGC TGATCCTTCA CCGCGACATT GCCGAGGAGG TGACGGCGCG CATCGCCGGC CTTTCGGCAA AGGTGAAGGT GGGCGATCCG CTCGATCCTG AAACGCAGGT CGGCGCGATC ATCACCCCGC AGCATCTTCA GAAGATCGCC GGCTATGTCT CGTCGGCGTC GAACGAAGGT GCGAGGGTGA CCCATGGTGG CATGGAGCTC GATCTCGGCA TGGGGCAGTT CATGGCTCCG ACCATCCTCT CTGCGGTCAG ACCCGAAATG GCAGTGGCGC GGGAGGAAGT CTTCGGCCCG GTTCTCTCTG TGCTGACTTT CGAAACGACG GAGGAGGCGA TCCGCATCGC CAATTCGATC GACTACGGAC TTTCGGCCGG TGTCTGGAGC CGTGATTTCG ACACCTGCCT TACGATCGGG CGGCGCGTGC GCGCCGGGAC CATCTGGATG AATACTTTCA TGGACGGCGC ATCGGAGCTG CCCTTCGGCG GCTACCGGCA ATCGGGGCTC GGCCGCGAAC TCGGACGCCA TGCGGTCGAG GATTATACGG AAACGAAGAC GCTCAACATG CATATCGGCC AGAGAACCAA CTGGTGGATG CCGCGCTGA
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Protein sequence | MTVLVRPKAL GEYKVREFRM LIDGQWVDSA EGRTIERVAP GHGVVVSRYQ AATKVDAERA IAAARRAFDQ GPWPRMTAAE RSLILLKVAD MVAARADELA FLDAVESGKP ISQAKGELAG AADIWRYAAA LARDLSGESY NTLGEGTLGV VLREPIGVVS IITPWNFPFL IVSQKLPFAL AAGCTTVVKP SELTSASTLV LGEILEAAGV PAGAVNIIVG TGPEAGAPLT THPHVDMVSF TGSTGIGRLT MANAAQTLKK VSLELGGKNP QIVFPDANLD EFIDAAVFGA YFNAGECCNA GSRLILHRDI AEEVTARIAG LSAKVKVGDP LDPETQVGAI ITPQHLQKIA GYVSSASNEG ARVTHGGMEL DLGMGQFMAP TILSAVRPEM AVAREEVFGP VLSVLTFETT EEAIRIANSI DYGLSAGVWS RDFDTCLTIG RRVRAGTIWM NTFMDGASEL PFGGYRQSGL GRELGRHAVE DYTETKTLNM HIGQRTNWWM PR
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