| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3170 |
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| Symbol | |
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| ID | 5324049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3331901 |
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| End bp | 3333145 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792118 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328829 |
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| Protein GI | 150398362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGT TCATGACGAC GACTGCTGTT GCAGCATTGA TGCTGGCGGC TACGGCCGCG
CGCGCTGCCG AGAATGTGGA AGTATTGCAC TGGTGGACGT CAGGCGGCGA AGCCGCGGCC
CTCGACGTCC TTAAGAAGGA TCTGGAGAGC AAAGGCATCA GCTGGACCGA CATGCCGGTC
GCCGGCGGCG GCGGCACCGA AGCCATGACG GTGCTTCGTG CCCGTGTCAC AGCGGGCAAT
GCACCGACGG CCGTGCAGAT GCTCGGCTTC GACATTCTCG ATTGGGCAAA AGAAGGCGCA
CTCGGCAATC TGGACGAGGT CGCCGCCAAA GAAGGCTGGG ACAAGGTCAT CCCCGCCGCC
CTGCAGCAGT TCTCGAAATT CGACGGCCAC TGGATTGCCG CGCCGGTGAA CGTCCACTCG
ACGAACTGGG TCTGGATCAA CAAGGCCGCG CTCGACAAGG CCGGCGCCAA GGAGCCGACG
ACCTGGGAAG AGTTGATCGC ACTGCTCGAC AAGTTCAAGG AGCAGGGCAT CACCCCGATC
GCTCATGGCG GGCAGCCCTG GCAGGATGCC ACGATCTTCG ACGCTGTGGT TCTTTCGCTC
GGCACCGACT TCTACAAGCA GGCCTTCATC GACCTCGATC CGGCAGCGCT CGGAGGCGAC
AAGATGAAGG AAGCTTTTAA CCGGATGACG AAGCTGCGCT CCTATGTGGA CGACAACTTC
TCCGGCCGCG ACTGGAACCT CGCCTCGGCG ATGGTCATCG AGAACAAGGC CGGCCTTCAG
TTCATGGGGG ACTGGGCGAA GGGCGAATTC CTGAAGGCGA ACAAGGTGCC CGGCACCGAT
TTCGTCTGCA TGCGCTACCC GGGGACTCAA GGCTCCGTAA CCTTCAACTC CGACCAGTTC
GCAATGTTCA AGGTTTCCGA GGACAAGGTC CCGGCGCAGC TGCAGATGGC CACGGCGATC
GAGAGCCCGG CCTTCCAGTC GGCGTTCAAT GTCGTCAAGG GGTCTGTTCC CGCCCGCACC
GACGTTCCCG ATACCGATTT CGACGCCTGC GGCAAGAAGG GCATCAAGGA CCTCGCGGAA
GCCAATACCA ACGGCACGCT CTTTGGATCC ATGGCGCATG GTCATGCCAA TCCGGCGTCT
GTCAAAAATG CGATCTACGA CGTGGTCACG CGCCAGTTCA ACGGCGAACT CAGCTCGGAG
GAGGCAGTCA CGGAACTCGT CGCTGCTGTC GAAGGCGCGA AGTAA
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| Protein sequence | MRKFMTTTAV AALMLAATAA RAAENVEVLH WWTSGGEAAA LDVLKKDLES KGISWTDMPV
AGGGGTEAMT VLRARVTAGN APTAVQMLGF DILDWAKEGA LGNLDEVAAK EGWDKVIPAA
LQQFSKFDGH WIAAPVNVHS TNWVWINKAA LDKAGAKEPT TWEELIALLD KFKEQGITPI
AHGGQPWQDA TIFDAVVLSL GTDFYKQAFI DLDPAALGGD KMKEAFNRMT KLRSYVDDNF
SGRDWNLASA MVIENKAGLQ FMGDWAKGEF LKANKVPGTD FVCMRYPGTQ GSVTFNSDQF
AMFKVSEDKV PAQLQMATAI ESPAFQSAFN VVKGSVPART DVPDTDFDAC GKKGIKDLAE
ANTNGTLFGS MAHGHANPAS VKNAIYDVVT RQFNGELSSE EAVTELVAAV EGAK
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