| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3166 |
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| Symbol | |
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| ID | 5324045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3327336 |
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| End bp | 3328856 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792114 |
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| Product | putative dehydrogenase transmembrane protein |
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| Protein accession | YP_001328825 |
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| Protein GI | 150398358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.689634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA GCATGAAGAG CCAACCGGAC ATCGTCATCA TCGGTTCGGG CGTCGGCGGC
GCGACGGTTG CTGCCGGGCT CGCCGCCTCC GGCGCCGAGA TCCTCATTCT CGAAGCCGGC
CACCACATCG AGGACCTGCC GGTAAATCGC GACCAGCGGG CGATCTTCCA GCGCGGCCAC
TTCCGACCGA AGGAAACTTG GTATGAAGAG GGTGGTCCCG GCTTCAATCC CGGGAATTAC
TACAATGTCG GAGGCAATTC GAAATTCTAC GGGGCGGTGC TCACCCGCTA CCGTCGTGAG
GATTTCGAGG AGATGCAGCA TCTGGACGGT GTTTCGCCCG CCTGGCCGTT TCCCTATGAG
GAGCTCGAAC CGTGGTATTC GAAGGCGGAA GAGCTCTATC AGGTGCGGGG CCGGCTCGGC
GAAGATCCGA CCGAGCCCGT TCATTCGCGC GATTACCCTC ATGGTCCGGT GCCGGACGAA
CCGGCGATCG CCAAGGTCCG CAAGCGCCTG GCGGAGGTTG GGATGCACCC CTATTCGCTG
CCGCTCGGGG TGGATATCGA CCGATGGCTC GCCAAAGGCA AGACGCCCTG GGACGCGCAT
CCGAACGCCT TCGACGGAAA GATGGATGCC GAGACGGCAG CTCTGGCGAC AGCACTCGAG
CATCCGAACG TGCACCTCCA GACCGGCTCT CGGGTGACGC GGCTTGCAAC CGCGCCGGAC
GGCAAGGCAA TCGAGACTGT TCACTACGTC AAGGATGGGA CGGAGCACCG CATCTCGCCG
AAGCTCGTGG TTCTCTCGGC AGGCGCGGTT CAGTCGGCAG TCCTGCTTCT GCGCTCGGCG
GACGACCGCA ATGCGTCGGG GCTTGCCAAC GGTTCCGATC AGGTCGGCCG CAATTTCATG
AACCACAATT CGAGCGCCGT CATTGCTCTC AGCCCCTGGT ACCGCAACGA TTCGGTTTAT
CAGAAGACCT TCGGTCTCAA TGATTTCTAT CTATCCGACG GGCAGGGCGG GCCGCCGCTC
GGCAATATTC AGCTCCTCGG CCGCATCTCC GGCGCGATCC TGAAGGCGAA CATGCCCGGC
TTGCCGGAAT GGCTCCTGAA CCAGGTATCG GCGCGCGGCA TCGACTTCTA CGCCATGAGC
GAGGATCTGC CTTCGTCGGA AAGCCGCGTG ATGGTCGATG GGGAGCGTGT CGTGCTGAAA
TGGGTACGCA CGAATTGGCA GGCGCATCTC GACCTCGTCG CCAAGCTGAA GGCGGTGCTC
AAAAAAGCCG GTTTCCCGAT CGTGGTCGCG CGAGCCTTCG ACAAGCGGAC GCCGTCGCAT
CAATGCGGCA CGGTGCGTAT CGGCATCGAT CCCGCACAGG CGCCGCTCGA CGTCTATTGC
CGCGCCTTCG ATCATCCGAA CCTCTTCGTC GTAGATGCCA GCTGCCTGCC GACCTCGGCC
GCCGTCAATC CGGCGCTGAC GGTCGCGGCC CAGGCGCTGC GCGTTGCGGA CCATATCGTG
AAACAGGACC TGCGATCATG A
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| Protein sequence | MSQSMKSQPD IVIIGSGVGG ATVAAGLAAS GAEILILEAG HHIEDLPVNR DQRAIFQRGH
FRPKETWYEE GGPGFNPGNY YNVGGNSKFY GAVLTRYRRE DFEEMQHLDG VSPAWPFPYE
ELEPWYSKAE ELYQVRGRLG EDPTEPVHSR DYPHGPVPDE PAIAKVRKRL AEVGMHPYSL
PLGVDIDRWL AKGKTPWDAH PNAFDGKMDA ETAALATALE HPNVHLQTGS RVTRLATAPD
GKAIETVHYV KDGTEHRISP KLVVLSAGAV QSAVLLLRSA DDRNASGLAN GSDQVGRNFM
NHNSSAVIAL SPWYRNDSVY QKTFGLNDFY LSDGQGGPPL GNIQLLGRIS GAILKANMPG
LPEWLLNQVS ARGIDFYAMS EDLPSSESRV MVDGERVVLK WVRTNWQAHL DLVAKLKAVL
KKAGFPIVVA RAFDKRTPSH QCGTVRIGID PAQAPLDVYC RAFDHPNLFV VDASCLPTSA
AVNPALTVAA QALRVADHIV KQDLRS
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