Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3154 |
Symbol | |
ID | 5324033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3304167 |
End bp | 3305324 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640792102 |
Product | hypothetical protein |
Protein accession | YP_001328813 |
Protein GI | 150398346 |
COG category | [S] Function unknown |
COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGAAA AGTCTTTTGC GGGCGGCGAG GATCACGGAA GTGTCGCCCA TCCGGTGCCG ACCGGGCGCG ACACACGTCT CGACGTGTTT CGCGCACTCT GCCTGCTGAC CATTTTCGTC AATCACGTCC CAGGTCAATA TCTCGAATAC CTGACGCATA AGAACTTCGG CTTTTCCGAC TCGGCGGAGG CCTTCGTGCT GATTTCCGGC CTTTCGGTGG GCGTTGCCTA TTCGGGCAAG TTCCTGGCCG GCGGACGGCT CGCCCTCACG CTGAAGATCT GGCGCCGTGC TCTCGCGCTC TATGTCGCGC ACATCATGAC GAGCGTGGTG ACGCTTGCGA TCTTCGCTGG CGGCGCACTC TATTTCGGCC GTCAGGAGCT GATTGGCGAG ATCAACATCC GCCCGATCGT CGAGCAGACG GAGCAGGGCA TCGTTGCCAT GGTGCTGCTC GGCCATCAGC TCGGCTACAA CAACATCCTG TCGATGTATG CGGTGCTGTT CCTGCTGCTG CCCGGCTTCC TCTGGCTGAA TGCCGCCAGC CCGCGATTGC TGTTCGCGTT TTCGGCCACT CTCTGGCTCG CCGCCGGCTG CCTCAAGATG GTGCCTTATA ATTTCCTCGA CGACGGATAC TGGTTCCTCA ATCCCTGGTC ATGGCAGTTC CTGTTCGTCA TCGGTATTCT GTGCATGAGC CATGTGCGGC GAGGCGGCAG TCTTCCGCGA AGCGCCTGGC TCACTGGACT CTCCACCACC TATCTGGTGA TTTCTGCCTT TTGGGTGCTG TTCTCCTGGT GGAGTATCGA CCTTTCCTTC GGGCTGCCCG CGGTACTGAC CGGCTTCGAC AAGACCTTCC TGTCACTGAC GCGGCTCCTG CATGTGCTGT CGCTCGCCTA TATTCTCGCA ACGGTTCCGT TCTTCAGCCG CCTGACGAGG CTGGAAAACA ATCACCCTCT GGTGATGATC GGGCGCCATT CGCTCGCGAT CTTCATATTC GGAACGATTC TCGCAATGGC GGGACAGGTA CTGCTTCTCG TCACCGACCG TGACAGGATT GTCGGCACGC TCTTCGTCAT CGGCGGCATC GGCCTGCACT TTGCCTATGC CTATTACCTC GAATGGCTGA AGGGGATGTC GGTGGCGAAG CCGCTGAAGG CGGCGTGA
|
Protein sequence | MLEKSFAGGE DHGSVAHPVP TGRDTRLDVF RALCLLTIFV NHVPGQYLEY LTHKNFGFSD SAEAFVLISG LSVGVAYSGK FLAGGRLALT LKIWRRALAL YVAHIMTSVV TLAIFAGGAL YFGRQELIGE INIRPIVEQT EQGIVAMVLL GHQLGYNNIL SMYAVLFLLL PGFLWLNAAS PRLLFAFSAT LWLAAGCLKM VPYNFLDDGY WFLNPWSWQF LFVIGILCMS HVRRGGSLPR SAWLTGLSTT YLVISAFWVL FSWWSIDLSF GLPAVLTGFD KTFLSLTRLL HVLSLAYILA TVPFFSRLTR LENNHPLVMI GRHSLAIFIF GTILAMAGQV LLLVTDRDRI VGTLFVIGGI GLHFAYAYYL EWLKGMSVAK PLKAA
|
| |