Gene Smed_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3154 
Symbol 
ID5324033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3304167 
End bp3305324 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content60% 
IMG OID640792102 
Producthypothetical protein 
Protein accessionYP_001328813 
Protein GI150398346 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA AGTCTTTTGC GGGCGGCGAG GATCACGGAA GTGTCGCCCA TCCGGTGCCG 
ACCGGGCGCG ACACACGTCT CGACGTGTTT CGCGCACTCT GCCTGCTGAC CATTTTCGTC
AATCACGTCC CAGGTCAATA TCTCGAATAC CTGACGCATA AGAACTTCGG CTTTTCCGAC
TCGGCGGAGG CCTTCGTGCT GATTTCCGGC CTTTCGGTGG GCGTTGCCTA TTCGGGCAAG
TTCCTGGCCG GCGGACGGCT CGCCCTCACG CTGAAGATCT GGCGCCGTGC TCTCGCGCTC
TATGTCGCGC ACATCATGAC GAGCGTGGTG ACGCTTGCGA TCTTCGCTGG CGGCGCACTC
TATTTCGGCC GTCAGGAGCT GATTGGCGAG ATCAACATCC GCCCGATCGT CGAGCAGACG
GAGCAGGGCA TCGTTGCCAT GGTGCTGCTC GGCCATCAGC TCGGCTACAA CAACATCCTG
TCGATGTATG CGGTGCTGTT CCTGCTGCTG CCCGGCTTCC TCTGGCTGAA TGCCGCCAGC
CCGCGATTGC TGTTCGCGTT TTCGGCCACT CTCTGGCTCG CCGCCGGCTG CCTCAAGATG
GTGCCTTATA ATTTCCTCGA CGACGGATAC TGGTTCCTCA ATCCCTGGTC ATGGCAGTTC
CTGTTCGTCA TCGGTATTCT GTGCATGAGC CATGTGCGGC GAGGCGGCAG TCTTCCGCGA
AGCGCCTGGC TCACTGGACT CTCCACCACC TATCTGGTGA TTTCTGCCTT TTGGGTGCTG
TTCTCCTGGT GGAGTATCGA CCTTTCCTTC GGGCTGCCCG CGGTACTGAC CGGCTTCGAC
AAGACCTTCC TGTCACTGAC GCGGCTCCTG CATGTGCTGT CGCTCGCCTA TATTCTCGCA
ACGGTTCCGT TCTTCAGCCG CCTGACGAGG CTGGAAAACA ATCACCCTCT GGTGATGATC
GGGCGCCATT CGCTCGCGAT CTTCATATTC GGAACGATTC TCGCAATGGC GGGACAGGTA
CTGCTTCTCG TCACCGACCG TGACAGGATT GTCGGCACGC TCTTCGTCAT CGGCGGCATC
GGCCTGCACT TTGCCTATGC CTATTACCTC GAATGGCTGA AGGGGATGTC GGTGGCGAAG
CCGCTGAAGG CGGCGTGA
 
Protein sequence
MLEKSFAGGE DHGSVAHPVP TGRDTRLDVF RALCLLTIFV NHVPGQYLEY LTHKNFGFSD 
SAEAFVLISG LSVGVAYSGK FLAGGRLALT LKIWRRALAL YVAHIMTSVV TLAIFAGGAL
YFGRQELIGE INIRPIVEQT EQGIVAMVLL GHQLGYNNIL SMYAVLFLLL PGFLWLNAAS
PRLLFAFSAT LWLAAGCLKM VPYNFLDDGY WFLNPWSWQF LFVIGILCMS HVRRGGSLPR
SAWLTGLSTT YLVISAFWVL FSWWSIDLSF GLPAVLTGFD KTFLSLTRLL HVLSLAYILA
TVPFFSRLTR LENNHPLVMI GRHSLAIFIF GTILAMAGQV LLLVTDRDRI VGTLFVIGGI
GLHFAYAYYL EWLKGMSVAK PLKAA