Gene Smed_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3153 
Symbol 
ID5324032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3302831 
End bp3303676 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content57% 
IMG OID640792101 
Productamidohydrolase 2 
Protein accessionYP_001328812 
Protein GI150398345 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTTC AAGGCGCCAC AGACGCCCAT GTTCATCTTT GGGACCCTGC CCGGAATGAC 
GACATTCTGG TCCTGAAACA TCAGCCAGAG CTTGTGGAAA CCGCCCGGCG CGATCGTCTT
GCCGCCCATC TGCGACGAAT AGAAGCGAAA GGAGCCATCG TTGTCCAATC CGCTCCGACA
AAGGCGCATT CTGACTGGCT GCGATCCGAG GCGGGCAACA TCGATGGCGT GATCGGAATC
GTCGGTTGGC TGGATATTTT TGCCGCGGAT TGTCGCGTAG AGATGGAGGA CCTGATTTCC
GATCCGCTTG TTTGCGGCAT CCGTATCATG CTGAACCGAA TGGCAAGCCC CGAGACCTTA
ATCAATCCGG CAAGTCTGAC ACGGATTGGA GAACTTGCGG ATTCCGGTCT GGCCATCGAA
TGCCTGACCC CTCCGGAACA CCTTGATGTC GTTGCTCGTT TGGCGACCGA AGTGGAGCGT
GCCCGGATCG TTGTAGACCA TTGTGGATTG CCTCCTGTGT CGAATGGTTT TGCGGAATGG
AAGGTGGATA TCGCATCGCT TGCCGGATTG CCGAATGTGA CGACCAAATT TTCCGGCCTG
ACCGAACCTT TCGGGCCGGA TGTCAGGCTT GCTGATATTG CGGAACGGGC CGATTGGATT
CTTGGGCTTT TCGGGCCTGC CCGCCTGATG GCTGCAAGCA ATTTCCCCGT TTGCGAACTT
GGCGGCGGGG TGGCGAGATG GAGCGAATTA CTGGAAGAAA TCCTAAGCAC TGCCGGGCTT
TCGCCGGAGG AGTACCAGGC GATTCGTTGC GGAAGCGCCT CACGTGTCTA TACGCGGGGA
CGATAG
 
Protein sequence
MIFQGATDAH VHLWDPARND DILVLKHQPE LVETARRDRL AAHLRRIEAK GAIVVQSAPT 
KAHSDWLRSE AGNIDGVIGI VGWLDIFAAD CRVEMEDLIS DPLVCGIRIM LNRMASPETL
INPASLTRIG ELADSGLAIE CLTPPEHLDV VARLATEVER ARIVVDHCGL PPVSNGFAEW
KVDIASLAGL PNVTTKFSGL TEPFGPDVRL ADIAERADWI LGLFGPARLM AASNFPVCEL
GGGVARWSEL LEEILSTAGL SPEEYQAIRC GSASRVYTRG R