| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3148 |
|---|
| Symbol | |
|---|
| ID | 5324027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3299209 |
|---|
| End bp | 3300009 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640792096 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001328807 |
|---|
| Protein GI | 150398340 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGG CCGCACTGAC GGGTGGAACG CCCAAGATCT CGATCCGGGA TATGACGCTT
GTCCATGTGA ACGAAGAACG GCGGCAATCC AATGTTTCCG TCGAAAACCT GACGCTGGAC
ATCATGGAGA ATGAATTTCT CTGCGTTGTC GGGCCATCGG GCTGCGGCAA GTCGACCTTG
CTTTCGGCAA TCGCCGGATT CATGCAACCG CAGACCGGAA CGGTTACGAT GAACGGAGAG
CGCATCACCA AACCCGGCGC GGATCGCGGG GTCGTGTTTC AGGAATATGC GCTTCTGCCG
TGGAAAACGG TGCTCGACAA TGTCGCGCTT GGCCTGAAAT TCAGAGGCGT GCCCAGGGCC
GATCGGGAGG CGAAAGCGAT GGAATATATC GCGATGGCCC GCCTGACCGA AGCGGCGAAA
AAATACCCGC ATGAGCTTTC CGGCGGGATG CGCCAGCGTG CGGCGGTGGC CAGAACGCTG
GCGAACACGC CGGAAATCAT GATGATGGAC GAACCTTTCG CCGCAGTCGA CGCGCAGACG
CGCCTGTCGC TTCAGGAGGA ATTGCTGCGG GTCTGGAATG ACAATCCGAT CACGGTCCTT
TTCATCACTC ATTCAGTTGA AGAGGCCGTG TTTCTTGCAG ACCGGGTCGC AGTCCTGACG
CCGGGGCCGG GAAAACTGCG TGAGATCGTG GAGATAGATA TCCCCCGCAA TGCGCGACAC
TGGGATACGA TCACAAGTGA CCCGGAATTC ATCGCATTGC GTGACCGGGT CATGGCACTC
GTCCGGGATC AAAACGGATG A
|
|---|
| Protein sequence | MNTAALTGGT PKISIRDMTL VHVNEERRQS NVSVENLTLD IMENEFLCVV GPSGCGKSTL
LSAIAGFMQP QTGTVTMNGE RITKPGADRG VVFQEYALLP WKTVLDNVAL GLKFRGVPRA
DREAKAMEYI AMARLTEAAK KYPHELSGGM RQRAAVARTL ANTPEIMMMD EPFAAVDAQT
RLSLQEELLR VWNDNPITVL FITHSVEEAV FLADRVAVLT PGPGKLREIV EIDIPRNARH
WDTITSDPEF IALRDRVMAL VRDQNG
|
|---|
| |