| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3146 |
|---|
| Symbol | |
|---|
| ID | 5324025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3296658 |
|---|
| End bp | 3298127 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640792094 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001328805 |
|---|
| Protein GI | 150398338 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | [TIGR03417] choline-sulfatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAGC CGAATGTCCT GTTCATATTC TCTGATCAGC ACGCGCAGAA AGTAGCGGGC
TGTTATGGCG ATGATGTCGT CCGAACGCCC AATATCGACC GGCTCGCGCA GGAAGGTGTG
CGCTTCGACA ATGCCTATTG CCCGTCACCG ATCTGCACGC CAAGCCGGAT GTCGATGCTG
ACCGCCCGCT GGCCGCACAG GCAGGAATGC TGGACGAATG ACGACATGCT TCGTTCGGAT
GTCCCGACAT GGCTGCACCG GGCGGGAGAG GCCGGCTACC GCCCCGCGCT GATCGGCCGG
ATGCATTCGA TAGGCCCGGA CCAGCTTCAC GGCTATGCCG AGCGTGGAAT CGGGGATCAT
ACGCCGAATT TCGCGGGGAT CGCACGATTT CCCATGGGTG TGCTTGAAGG CACCAACGAA
CCGGATTCCG TATCCCTGAC GCAAAGTGGA GCGGGAATGG CGATCTACCA GCGGAAAGAT
CAGGACGTCG TGGATGCCGC TGCGGCCTGG CTTCGGGATA AGGGAGCGGC CAGAAACGCC
GCCGGGCAGC AATTTTGCCT GACGGTCGGG CTGATGACGC CGCATGCCCC CTATGTCGTC
GATCGCGAGG CCTTCGACCA TTATCACGGG CAAGTACCGC CGCCCCGTCT GGATGTGCCG
CAGGACGAGC ATGACTGGCA TCGGTGGTGG CGTCACGACC GCGGCATCGG CGAAGTGTCT
GATGCAGTCA GGGATCGCGC CCGTGCCGCC TATTGGGGGC TTGTGCAGCG CACCGATGAA
ATGATCGGGC AGGTTCTCGA CGCGCTCAAG GAAATCGGCG CGATGGACGA TACCCTGATC
GTCTATGCGT CCGATCACGG CGACCATGTC GGAGAACGTG GCCTGTGGTG GAAACATACA
TTCTTTGAAG AATCCGTGAA GTTTCCGCTG GTGATGCGGC TTCCCGGCGC CATTCCGGCG
GGCGAAAGCC GGGATCAGGT CGTCAATCTG GTCGATCTCA GCCAGACGAT GATCGAGGTC
ATGGGGGCTC AGCCTTTGCC CTATGCGGAT GGCAAAAGTT TCTGGGCCGT TGCCTGTGAT
CGCGAAGCGC CATGGGAGAA CGAGACATTC AGCGAATACT GTACGGATCC GGTACCATCA
TGGACCGGAG GACGGGCTGT GCAGCAGCGG ATGATCCGGT CAGGTTCGTG GAAATTGTCC
GTCTATGACG GCGAGCCGCC GCTTTTGTTT GATCTGTCCA CAGATCCGGA TGAGCGTATC
AATCGCGCCG AGGACCCGGA TTGTGCGGAA ATGTTTCAAC GATTGTCGGC GCGCCTGGCC
CATGACGGTT GGCGGCCCGA AACGGTTGCC GCCCGCATGC GGGAACGACG AGCCGAGAAA
GACATTCTCG CCGCTTGGGC GCGTGAGGTT CAGCCAGCGC AGACCCATGT CTGGGAATAC
ACCGCCGATA TGAACAGACT CGATAACTAA
|
|---|
| Protein sequence | MNKPNVLFIF SDQHAQKVAG CYGDDVVRTP NIDRLAQEGV RFDNAYCPSP ICTPSRMSML
TARWPHRQEC WTNDDMLRSD VPTWLHRAGE AGYRPALIGR MHSIGPDQLH GYAERGIGDH
TPNFAGIARF PMGVLEGTNE PDSVSLTQSG AGMAIYQRKD QDVVDAAAAW LRDKGAARNA
AGQQFCLTVG LMTPHAPYVV DREAFDHYHG QVPPPRLDVP QDEHDWHRWW RHDRGIGEVS
DAVRDRARAA YWGLVQRTDE MIGQVLDALK EIGAMDDTLI VYASDHGDHV GERGLWWKHT
FFEESVKFPL VMRLPGAIPA GESRDQVVNL VDLSQTMIEV MGAQPLPYAD GKSFWAVACD
REAPWENETF SEYCTDPVPS WTGGRAVQQR MIRSGSWKLS VYDGEPPLLF DLSTDPDERI
NRAEDPDCAE MFQRLSARLA HDGWRPETVA ARMRERRAEK DILAAWAREV QPAQTHVWEY
TADMNRLDN
|
|---|
| |