| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3133 |
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| Symbol | ispG |
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| ID | 5324012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3282410 |
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| End bp | 3283663 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792083 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001328794 |
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| Protein GI | 150398327 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTG CCTTCGATTT CGAACCACAG CCGCGTCGCG CATCGGTCGC CGTCGATGTC
GGCGGCGTGA TCGTCGGCGG CGGTGCCCCG GTCGTCGTCC AGTCGATGAC CAACACCGAC
ACGGCCGATA TCGATGCGAC CGTGGCGCAG GTGGCGGCGC TCCACAAAGC GGGATCGGAG
CTGGTGCGCA TCACCGTCGA CCGCGACGAG AGCGCCGCGG CCGTGCCGAA GATCCGCGAG
CGGCTCCTGC GTCTCGGCTT GGACGTGCCG CTTGTCGGCG ATTTTCATTA TATCGGCCAC
AAACTGCTTG CCGATCATCC GGCCTGCGCA GAGGCGCTTG CAAAATACCG CATCAATCCC
GGCAATGTCG GCTTCAAGGA CAAGAAGGAC AAGCAGTTCG CCGAAATCGT CGAGATGGCG
ATCCGCTACG ACAAGCCGGT GCGCATCGGG GTGAACTGGG GCTCGCTCGA CCAGGAGCTC
CTGACGCGGC TGATGGACGC CAACAAGGCG AATGGCTTTC CATTGACGGC ACAGCAGGTG
ACGCGCGAGA CGATCGTGCA GTCGGCGCTC CTTTCGGCCG AACTTGCCGA GGAGCTCGGC
CTGCCTCGAA ACAGGATCAT TCTTTCCGCC AAGGTTTCCG GCGTCCAGGA TCTGATCGCC
GTCTATGCGA TGCTCTCCGC GCGTTCCGAC CATGCACTTC ACCTCGGGCT CACCGAGGCC
GGCATGGGAA CAAAGGGTAT CGTCGCTTCC TCCGCCTCGC TCGGTATTCT GATGCAGCAG
GGGATCGGCG ACACGATCCG CATTTCGCTT ACTCCGGAGC CGGGCGGCGA CCGCACCCGC
GAGGTACAGG TGGCGCAGGA GCTTCTGCAG GTGATGGGTT TCCGCCAGTT CATCCCGGTC
GTGGCGGCCT GTCCGGGGTG CGGCCGCACC ACTTCCACGG TCTTTCAGGA ACTTGCCCAG
AAGATTCAGG AGGATATCCG CTCGAGCATG CCGGTCTGGC GCGAGAAATA TCCGGGCGTC
GAGGCGCTGA AGGTCGCGGT CATGGGCTGC ATCGTCAACG GGCCCGGCGA GAGCAAGCAT
GCCGATATCG GAATTTCGCT TCCGGGAACC GGCGAAATGC CGGCCGCTCC CGTCTTCATC
GACGGTCACA AGGCGATGAC GCTCCGCGGG CCGAAGATCG CGGAGGACTT CCAGCTTCTC
GTTGCCGATT ACATCGAGAA ACGCTTCGGC CACGGCCAGG CGGCGGCGGA GTAA
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| Protein sequence | MSSAFDFEPQ PRRASVAVDV GGVIVGGGAP VVVQSMTNTD TADIDATVAQ VAALHKAGSE
LVRITVDRDE SAAAVPKIRE RLLRLGLDVP LVGDFHYIGH KLLADHPACA EALAKYRINP
GNVGFKDKKD KQFAEIVEMA IRYDKPVRIG VNWGSLDQEL LTRLMDANKA NGFPLTAQQV
TRETIVQSAL LSAELAEELG LPRNRIILSA KVSGVQDLIA VYAMLSARSD HALHLGLTEA
GMGTKGIVAS SASLGILMQQ GIGDTIRISL TPEPGGDRTR EVQVAQELLQ VMGFRQFIPV
VAACPGCGRT TSTVFQELAQ KIQEDIRSSM PVWREKYPGV EALKVAVMGC IVNGPGESKH
ADIGISLPGT GEMPAAPVFI DGHKAMTLRG PKIAEDFQLL VADYIEKRFG HGQAAAE
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