| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3125 |
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| Symbol | |
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| ID | 5324004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3273447 |
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| End bp | 3274934 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792075 |
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| Product | ABC transporter related |
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| Protein accession | YP_001328786 |
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| Protein GI | 150398319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCC ACTCTCCCAT CCTGTCGCTC CGTCGCATCC GCAAATCCTA CGGTCCGATC
AAGGTTCTCC ACGGTATCGA CCTCGATATC CATCCGGGAG AGGTGGTGGC GCTGCTCGGC
GAAAACGGTG CCGGAAAATC GACGCTGTCG AACATTATTT CCGGCACCGT GCAACCCTCA
GCGGGCGAAA TGACCTGGCT GGGCAGGGCC TACGCCCCCG CAGATCCCCG TGCCGCGATG
GAGGAGGGGA TAGGCATGAT CCATCAGGAA CTGAAACTGC TCCCGAAGCT CTCCATCGCG
GAGAACGTGT TCGTCGGCCG CTACCCGATG AAGGCGGGGC GGATCGATCG CAAAACTATG
GAAGATCGGG CACGCAGCGG CCTGCACCGG CTCGGTCTCG ACATCTCGCC GGATCGCCTC
GTCGACGGGC TTTCGACCGG CAAGCAGCAG CTCATCGAGA TCGCCAAGGC GTTGACGCTC
AATGCGCGCC TCCTGATTCT CGACGAACCG ACGGCCGCGC TCGGCGCCGA GGAGACCCAG
CTCCTCTTCC GGCAGATCGA ACGGCTGAAG TCGGAAGGCG TCGGCATCAT CTACATTTCG
CACCGCCTGG AGGAGATCCG CAAGATCGCC GACCGCATTG TCGTGATGCG CGACGGCGCC
AAGGTGCAGG AGTTCGAGAG TGGCGACGTG CCGATACGCA CGATCGTCGA GGCCATGGTC
GGGCGCTCAC TCGAGCGCAT GTTCCCGACC CTTCCGGCCC CGACGGACCA GGTGACGCTG
GAGGTACGAA ATCTCTCGTC GCCGTCCAAC GCATTCCGGG ACATCAGCTT TTCGGTTCGC
AGGGGCGAGG TTTTCGGCAT TGCGGGCCTC ATGGGAGCCG GCCGGACCGA ACTCGTACGC
GCCATCAGCG GCGCCGACCC CATTTCCAGC GGCGAAGTCC TGCTGCACGG CAGGCCCGTC
ACGCCCCGCT CTCCGATCGA TGCGATCCGC AACGGCATCG TTCTCGTGCC GGAGGATCGA
AAGCTCCAGG GCGTCGTGCT CGATCATTCG ATCGCGGAAA ATATCGGCTA TGCCAACCTC
GGCGAAATCT CCCGCAGCGG CTGGGTCTCC TCGCGCCGCA TTCGGCAGTT CGCCGAGGAG
TGCATCAAGA CGTTCGGAGT AAAAGGCCGC GGGGGGCAGA ATGCCGGGGA GCTTTCCGGC
GGCAACCAGC AGAAAGTGGT GCTCGCCAAA TGGCTGGCGC GAAAACCGCA GGTGGTCGTG
CTGGACGAGC CGACGCGCGG CATCGACGTA GGCGCCCGCT CGTCGATCTA CGATCTCATC
ATCGATCTCG CCCGCGAGGG CGTCGCAGTC ATCGTGGTCA GCTCGGATCT CGAAGAGGTG
CTCGGCGTCT CCAGCCGCAT CCTGGTCATG GCGCAGGGCA AGCAGGCCGG CATCCTGAAC
CGCGAGGATG CGAACGACGT CTCTGTCATG GAACTGGCAA CGATCTAA
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| Protein sequence | MTPHSPILSL RRIRKSYGPI KVLHGIDLDI HPGEVVALLG ENGAGKSTLS NIISGTVQPS
AGEMTWLGRA YAPADPRAAM EEGIGMIHQE LKLLPKLSIA ENVFVGRYPM KAGRIDRKTM
EDRARSGLHR LGLDISPDRL VDGLSTGKQQ LIEIAKALTL NARLLILDEP TAALGAEETQ
LLFRQIERLK SEGVGIIYIS HRLEEIRKIA DRIVVMRDGA KVQEFESGDV PIRTIVEAMV
GRSLERMFPT LPAPTDQVTL EVRNLSSPSN AFRDISFSVR RGEVFGIAGL MGAGRTELVR
AISGADPISS GEVLLHGRPV TPRSPIDAIR NGIVLVPEDR KLQGVVLDHS IAENIGYANL
GEISRSGWVS SRRIRQFAEE CIKTFGVKGR GGQNAGELSG GNQQKVVLAK WLARKPQVVV
LDEPTRGIDV GARSSIYDLI IDLAREGVAV IVVSSDLEEV LGVSSRILVM AQGKQAGILN
REDANDVSVM ELATI
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