| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3124 |
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| Symbol | |
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| ID | 5324003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3272642 |
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| End bp | 3273430 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792074 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001328785 |
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| Protein GI | 150398318 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA TCAGTCTTGA CGCACCGAAA TTGTTCGATC TTGCCGGAAA CGTCGCCCTC
GTGACCGGCG CGGGCAGCGG CATCGGCCAA CGCATCGCCA TCGGTCTCGC ACAGTGCGGC
GCAGATGTCG GGTTACTAGA CCGACGGACC GATGATGGTC TCGCGAAGAC GGCCGATCTC
ATCGAAAAGG CTGGGCGTCG CAGCATTCAG ATCGCCGCTG ATGTCACCAG CGGCGCGGCG
CTCGACGAGG CGGTTGCGCG CACAGAAGCG GAGCTGGGCC CGCTGACCCT CGCGCTCAAC
GCCGCGGGCA TCGCCAATGC TCATCCGGCG GAGGAGATGG AGGAAACTCA GTTCCAGACG
ATGATGGACG TCAATCTGAA AGGCGTTTTC CTCTCCTGCC AGGCGGAAGC GCGCGCCATG
TTGAGGAACG GACGCGGGTC GATCGTCAAC ATCGCCTCGA TGTCCGGCGT CATCGTGAAT
CGAGGACTTA ACCAGTGCCA CTACAACGCC TCTAAGGCGG GTGTAATTCA CATGTCGAAG
TCCATGGCGA TGGAGTGGGT AGGCCGCGGC ATCCGGGTCA ACACCATCAG TCCGGGCTAT
ACGGCAACAC CTATGAATAC TAGACCGGAA ATGGTGCACC AGACCAGGCT CTTCGAGGAA
CAGACGCCGA TGCAGCGCAT GGCTGGCGTG GACGAAATGG TCGGCCCGGC CGTTTTCCTT
CTGTCGGATG CGGCGAGCTT CGTAACCGGA GTAGACCTTC TCGTTGATGG CGGCTTCTGC
TGCTGGTGA
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| Protein sequence | MSEISLDAPK LFDLAGNVAL VTGAGSGIGQ RIAIGLAQCG ADVGLLDRRT DDGLAKTADL
IEKAGRRSIQ IAADVTSGAA LDEAVARTEA ELGPLTLALN AAGIANAHPA EEMEETQFQT
MMDVNLKGVF LSCQAEARAM LRNGRGSIVN IASMSGVIVN RGLNQCHYNA SKAGVIHMSK
SMAMEWVGRG IRVNTISPGY TATPMNTRPE MVHQTRLFEE QTPMQRMAGV DEMVGPAVFL
LSDAASFVTG VDLLVDGGFC CW
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