Gene Smed_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3120 
Symbol 
ID5323999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3268940 
End bp3269587 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID640792070 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_001328781 
Protein GI150398314 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC TCGTCCTCTA TGTCGGCAAC AAGAACTATT CGTCCTGGTC GCTCCGGCCA 
TGGCTGGCAC TCACGGCCAG CGGCATTCCG TTCGAAGAGG TCGTCATTCC CTTCGACTTT
CCCGCCGGCA ACCCCCGCAT TCGCGAGATG TCGCCGACAG GACGTGTTCC GGTACTCCAT
CATGGCGAAA CCCGCGTGTG GGAATCGCTC GCCATTATCG AATATGCGGC GGAGCTCTTT
CCGGAGGCTG GCCTCTGGCC CGATAGCCGC GAGGATCGCG CACGCGCGCG GAGCTATTCG
ATGGAGATGC TCTCCGGCTT CCAGGCACTG CGCGGCGCCT GCCCCATGAA CATCCGCCGG
TCGAAGAAGG CGATCGATCT GCCCGACGGC GTTACCGAGG ATGTGGCGCG GATCGAGACG
ATCTGGCACG AGCAAACCGC GCGGTCTGGC GGTCCGTTCC TCTTTGGCCG GTTCACCGCC
GCGGATGCCA TGTTCGCACC TGTCGTCATC CGCTTCGAAG TCTATGACCT CGTGAAAGAT
CCGGCGACGC TTGCCTATAT GGCGGCCGTC CGAGGGCATC CGGCCTTCCG CAAGTGGGAA
GAGGCCGCGA AAGCCGAGCC CTGGATCGTT CCGGAGGATG AAGCCTGA
 
Protein sequence
MAKLVLYVGN KNYSSWSLRP WLALTASGIP FEEVVIPFDF PAGNPRIREM SPTGRVPVLH 
HGETRVWESL AIIEYAAELF PEAGLWPDSR EDRARARSYS MEMLSGFQAL RGACPMNIRR
SKKAIDLPDG VTEDVARIET IWHEQTARSG GPFLFGRFTA ADAMFAPVVI RFEVYDLVKD
PATLAYMAAV RGHPAFRKWE EAAKAEPWIV PEDEA