Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3116 |
Symbol | |
ID | 5323995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3265713 |
End bp | 3266438 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640792066 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001328777 |
Protein GI | 150398310 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.937548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGG TAGCATTGGT CACGGGCGGA TCGCGCGGCA TCGGCGCGGC AATCGCCATC GCGCTGAAGG CAGCGGGCTA CAAGGTGGCT GCGAATTACG CGGGCAATGA CGAAAAAGCC CAGGCTTTCA AACAGGAGAC CGGCATCCCC GTTTATAAGT GGGATGTCTC GAGTTACGAG GCCTGCGTCG ACGGCATTGC CAGGGTCGAG GCGGACCTGG GGCCGGTAGA TATCCTCGTC AACAATGCCG GCATCACACG TGACGCGATG TTCCACAAGA TGACGCCGCA ACAATGGGGC GAAGTCATAG GCACGAATCT CACCGGCGTT TTCAACATGA CGCATCCGAT CTGGTCGGGG ATGCGCGACC GCGGGTTCGG CCGCATCGTC AACATCTCGT CGATCAACGG TCAGAAGGGG CAGATGGGAC AGGCGAACTA TTCTGCCGCC AAGGCCGGCG ATCTCGGCTT CACCAAGGCG CTTGCTCAGG AAGGGGCAGC GAAGGGAATC ACGGTAAATG CCATTTGCCC GGGTTATATC GGCACGGAAA TGGTGCTCGC CGTACCGGAG AAGGTGCTTA ACGAGCGGAT CATCCCGCAG ATACCCGTCG GCCGCCTGGG CGAACCGGAA GAAGTCGCGC GATGCGTCGT GTTCCTCGTG TCGGATGATG CCGGCTTCAT TACCGGTTCC ACGATCTCGG CCAATGGTGG CCAGTACTTC GCCTGA
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Protein sequence | MSRVALVTGG SRGIGAAIAI ALKAAGYKVA ANYAGNDEKA QAFKQETGIP VYKWDVSSYE ACVDGIARVE ADLGPVDILV NNAGITRDAM FHKMTPQQWG EVIGTNLTGV FNMTHPIWSG MRDRGFGRIV NISSINGQKG QMGQANYSAA KAGDLGFTKA LAQEGAAKGI TVNAICPGYI GTEMVLAVPE KVLNERIIPQ IPVGRLGEPE EVARCVVFLV SDDAGFITGS TISANGGQYF A
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