| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3112 |
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| Symbol | |
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| ID | 5323991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3259740 |
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| End bp | 3260309 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640792062 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_001328773 |
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| Protein GI | 150398306 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000522164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC AGCAGAAGAA ATCTTCAACG CGCCAAGGCT TCAAGACCGG TGAATCGATC
GTTTATCCGG CTCATGGCGT TGGCCAGATC GTCGCGATCG AGGAACAGGA AGTCGCGGGC
ATGAAGCTCG AACTTTTCGT CATCGACTTC GAGAAGGATA AGATGCGCCT CAAGGTCCCC
GTGGCGAAGG CTGTGGGTAT CGGTATGCGC AAGCTGTCCG AAACCGATTT CGTCGACCGC
GCGTTGAAGG TCGTGCAGGG CAAGGCGCGC GTGAAACGGA CCATGTGGTC GCGGCGTGCC
CAGGAGTACG ATGCCAAGAT CAACTCCGGC GACCTCATTT CCATCGCGGA AGTGGTGCGC
GATCTTTATC GTGCCGAAAA CCAGCCGGAG CAGTCCTATT CCGAGCGCCA GCTCTATGAA
GCCGCGCTTG ACCGGATGGC GCGCGAAATC GCTGCCGTGA ACAAGATGTC GGAGACTGAA
GCCGTTCGTC TCGTCGAGGC CCATCTCAAC AAGGGTCCGA AACGCGGCAA GGCTATCGAA
GAAGACGACG CACAGGACGA AGCCGCCTAG
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| Protein sequence | MTTQQKKSST RQGFKTGESI VYPAHGVGQI VAIEEQEVAG MKLELFVIDF EKDKMRLKVP
VAKAVGIGMR KLSETDFVDR ALKVVQGKAR VKRTMWSRRA QEYDAKINSG DLISIAEVVR
DLYRAENQPE QSYSERQLYE AALDRMAREI AAVNKMSETE AVRLVEAHLN KGPKRGKAIE
EDDAQDEAA
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