| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3109 |
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| Symbol | |
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| ID | 5323988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3255501 |
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| End bp | 3256208 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792059 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_001328770 |
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| Protein GI | 150398303 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCA CCGCTCTCGC CCTCAGGGGC GTCGAGATAA GCTTTGACGC GACGACGCTC
GCCTTCGACT GCACCATTGC CGCGGGCGGT ATCGTCGCGG TCGCCGGCGC ATCCGGTTCG
GGCAAGTCGA CACTCTTCAA CGTCATTGCC GGCTTCGAGC CGCCCGATCG TGGAGAGGTC
CGCATTTTCG GCGAGGAGAT GGCTGGCCGC CCACCGGCGG AACGCCCGGT CTCCGTCATC
TTCCAGGAGC ATAACCTTTT CGCGCATCTC GACGTGGCCA CCAATGTCGG CTTCGGCATC
AGCGCGGCGC TGCGGCTCGG CGCGGCCGAG CGCATGAAGG TGGAGGATGC GCTCAGCCGG
GTGGGCCTCG CCGGATTCGG CAGCCGCCTT CCCCCGACCC TGTCGGGCGG GGAACGTCAG
AGGGTAGCGC TCGCCCGGGC TTTCGTAAGG CACCGGCCGA TACTCCTGCT CGACGAGCCT
TTCGCGGCGC TCGATCCCGG CCTGCGGACG GAGATGCGTA GTCTCATCCG CGATTTGCAC
CAGGAGGAAG GCAATACGAT ACTGATGATC ACGCATCATC CCGATGACGT GAGGGCGCTG
GCCGAAAGCG TCATTTTCCT CGACCAGGGC CGTATTATCG CCCATGATGA GACCCCCAGG
TTTTTCGAGC GCCGAGACAT TCCTGCAATC AGCCGGTTCC TCGGGTAA
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| Protein sequence | MISTALALRG VEISFDATTL AFDCTIAAGG IVAVAGASGS GKSTLFNVIA GFEPPDRGEV
RIFGEEMAGR PPAERPVSVI FQEHNLFAHL DVATNVGFGI SAALRLGAAE RMKVEDALSR
VGLAGFGSRL PPTLSGGERQ RVALARAFVR HRPILLLDEP FAALDPGLRT EMRSLIRDLH
QEEGNTILMI THHPDDVRAL AESVIFLDQG RIIAHDETPR FFERRDIPAI SRFLG
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