| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3105 |
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| Symbol | |
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| ID | 5323984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3251309 |
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| End bp | 3251971 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792055 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_001328766 |
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| Protein GI | 150398299 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTAG CGATGACCCG ACCACCCTTC ACAATCCTTC TCGGCGGTGC GCTGATGCCG
ACCGGCCGTC TTGCTCGACA GCTCGAAGGC AGCCGGTTTG TCGCGGCCGA CGGCGGCATG
CGCCACGCGA GGACGCTCGG GATCGTGCCC GATCTCTGGG TGGGCGATTT CGATTCGACC
GACGACGCTC TTCTGGCGGA GTTTGCGGAT GTCCCGCGGG AACGCCATCC CGCCGCCAAG
AACGCGACGG ATGGCGAGAT CGCCGTCGAG GCGGCTGTCG GGCGTGGCGC GTCCTCGCTG
ATCTTCGCGG GCGGGCTCGG CGGCGCGCGC AGCGACCACG CCTTCCTGCA TCTCCTCGGC
ACCGTAGCTC TTGCCGAGAG CGGGATTGAC GTGATGATGA CCTCCGGAGA AGAGGAAGCC
TATCCGCTGC TGCCCGGTTC GCAGGAGATC GAGCTACCGG AAGGCAGCCT TTTCTCGATT
CTGGGCTTTT CGGATCTTGA TGGCCTCTCG ATCGAGAACG TGCGGTATCC CCTCAAGGAG
TTCCATTTGC CCTTCGGCTC CTCGCGCACC ATTTCGAACA TCGCGGACGG AACGGTCCGC
TTCACCCTGA AATCCGGCCG GGCCGTCATC CTCGCCCGGC CCTATGATCT TTCCGGAGCC
TGA
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| Protein sequence | MGLAMTRPPF TILLGGALMP TGRLARQLEG SRFVAADGGM RHARTLGIVP DLWVGDFDST
DDALLAEFAD VPRERHPAAK NATDGEIAVE AAVGRGASSL IFAGGLGGAR SDHAFLHLLG
TVALAESGID VMMTSGEEEA YPLLPGSQEI ELPEGSLFSI LGFSDLDGLS IENVRYPLKE
FHLPFGSSRT ISNIADGTVR FTLKSGRAVI LARPYDLSGA
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