| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3104 |
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| Symbol | |
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| ID | 5323983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3249478 |
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| End bp | 3251304 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792054 |
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| Product | ABC transporter related |
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| Protein accession | YP_001328765 |
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| Protein GI | 150398298 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.73656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCCTC CCATTTTGAA GCTGGACGAC ATTTTCCTGA CCTTCGGCGG CACGCCGCTG
CTTGCGGGGG CAGGCCTGCA GGTGGAGTCC GGCGACCGCA TCTGCCTCGT CGGCCGCAAC
GGCTCGGGCA AGTCGACGCT GATGAAGATC GCTGCCGGGC TGGCTGAGCC GCAGTCGGGA
GAGATATTCA GACATCCCTC CGTGACGATC CGATATCTGC ACCAGGCGCC CGATTTCGAG
GGATTCGATA CCGTACAGGC CTATGCGGAA GCAGGCCTTG GTCCCGGCGA CGATCCTTAC
CGGGTCGTCT ACCTGCTGCA GCATCTGGGG CTGACCGGCG AGGAGGAGCC GCAGCGCCTT
TCCGGAGGTG AGGCGCGGCG TGCCGCGCTC GCTCGCGTGT TGGCGCCGGA GCCCGACATA
CTGCTTCTCG ACGAGCCGAC GAACCATCTC GACCTGCCGA CGATCGAGTG GCTGGAAGAC
GAGCTCGTCC GCAGCCGATC GGCACTGGTG CTGATCTCGC ACGACCGGCG TTTTCTCGAA
AACGTGTCGA CGGCGACCGT CTGGCTCGAC AGGGGCCAGT CGCGGCGTCT TGACCGGGGC
TTCGCTCATT TCGAGGCATG GCGCGACGAG GTGCTGGAAG CGGAAGAACT CGAGCAGCAC
AAACTCGGAA AAGCGATCGA GCGTGAGGAG CACTGGCTGC GCTATGGAGT GACCGCGAGG
CGCAAGCGCA ATATGCGCCG GTTGGGTGAG TTGCACGACA TGCGGGCTCG CCATCGCGGG
CACAAGGGCC CGCAGGGGAC CGTGCAAGCG ACGGCTGCCG ATGCCAAGGA GTCCGGCAAG
CTCGTCATCG AGGCGGAAAA AATCACCAAG GCTTACGGTG ACCGCGTGAT TGTCGCGCCC
TTTTCGATCC GCGTCCATCG CGGCGATCGG ATCGGCCTCG TCGGGCCGAA CGGCGCCGGC
AAGACGACGC TCCTGAAGCT CCTGACCGGC CAGATCGCGC CGGATAGCGG CAGCATCCGG
CTGGGCACCA ATCTTGAGAT CGCGACGCTC GACCAGAAAC GCGAAGAGCT GAACCTGGAC
GAGACCTTGG CGCATTATCT GACCGACGGA CGCGGCGAGA CCCTCCTCGT CAATGGCGAG
CAGCGCCATG TCACCGGCTA TATGAAGGAA TTTCTTTTCC AACCGGAGCA GGCGCGTACG
CCCATTCGCG ACCTGTCTGG CGGCGAGCGA GCGCGCCTCA TGCTTGCTCG CATCCTGGCG
CGTCCCACCA ATCTTCTGAT CCTCGACGAG CCGACCAACG ACCTTGACAT CGAGACGCTC
GACCTTCTGC AAGAAATTGT CGCCGGATTT GCGGGAACCG TGATCCTCGT CAGTCACGAT
CGCGATTTCC TCGACCGTAC GGTGACATCC ACGATCGCAC CGGCCAACCC GGAAACGCCC
GATGGCCGCT GGATCGAATA TGCCGGCGGC TATTCCGATA TGATGGCGCA GCGCCGGGGG
GCGCTCGCGG ATAAACGCAG GAGCGAGAAG GGCGGGAAGG CGAAGTCGAG CGATGCCTCG
CCCTCGCCGA GCGAGCCTCA GAAAGCGAAG GGCAAGCTTT CCTACAAGCA GAAATTCGCG
CTCGAAAACC TGCCGAAAGA GATTGCCGGC ACGGAAGCGA AGATCGCCAG GTGCGAAGAG
AGAATGGCCG ATCCGGAGCT TTTCTCGCGC GACCCGAACA GCTTCGCCAA GCTCGCCGCG
GAGCTCGATA CGTTGAAGAC GGCCCTGATA CGGATGGAAG AGGAGTGGCT CGAACTCGAA
ATGCTGCGCG AGGAGATCGA GGGCTGA
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| Protein sequence | MAPPILKLDD IFLTFGGTPL LAGAGLQVES GDRICLVGRN GSGKSTLMKI AAGLAEPQSG
EIFRHPSVTI RYLHQAPDFE GFDTVQAYAE AGLGPGDDPY RVVYLLQHLG LTGEEEPQRL
SGGEARRAAL ARVLAPEPDI LLLDEPTNHL DLPTIEWLED ELVRSRSALV LISHDRRFLE
NVSTATVWLD RGQSRRLDRG FAHFEAWRDE VLEAEELEQH KLGKAIEREE HWLRYGVTAR
RKRNMRRLGE LHDMRARHRG HKGPQGTVQA TAADAKESGK LVIEAEKITK AYGDRVIVAP
FSIRVHRGDR IGLVGPNGAG KTTLLKLLTG QIAPDSGSIR LGTNLEIATL DQKREELNLD
ETLAHYLTDG RGETLLVNGE QRHVTGYMKE FLFQPEQART PIRDLSGGER ARLMLARILA
RPTNLLILDE PTNDLDIETL DLLQEIVAGF AGTVILVSHD RDFLDRTVTS TIAPANPETP
DGRWIEYAGG YSDMMAQRRG ALADKRRSEK GGKAKSSDAS PSPSEPQKAK GKLSYKQKFA
LENLPKEIAG TEAKIARCEE RMADPELFSR DPNSFAKLAA ELDTLKTALI RMEEEWLELE
MLREEIEG
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