| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3103 |
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| Symbol | |
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| ID | 5323982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3248385 |
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| End bp | 3249209 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792053 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001328764 |
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| Protein GI | 150398297 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.264371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG TCCAATCATC CGACACTCCG TCTCAGAAGG GCGATTATCC CTGGTGGCTG
ATCGCCCTGA TCCTCATCGC GGCGGCGCTG GCTCTTGTCA TTGCTGCCAA TGACATATTC
ACGCAGGTAT TCACAGTCGT CCTGAAGGGA CTGGGCGTCA CCGTATTCGT AACTCTCGTC
GGCTTCGTGC TTGCGACGCT GCTCGGCCTC GGTGTCGCCC TGATGGCGCT TTCCGGGCAT
GTTGCGCTGC GCCAGATTGC GCGCTTCTAC ACGGAAGTCA TCCGCGGCGT GCCTATTCTC
GTGCTCCTGT TCTACATCGC CTTCGTCGGC GCGCCAGCGT TGGTAACGGC TGCGAATTTC
GTGGCGGCCC CCCTGATCTC GGCGGGATGG ATGGAGGCGT TCGTCGTGCG CGACGTTTCC
CTGATGTGGC GCGCGATCAT CGCGCTGATG ATCGGCTACT CGGCCTTCAT CGCCGAGGTA
TTCCGCGCCG GCATCCAGTC GGTCGACAAG GGCCAGGTGG AGGCGGCGAA GGCGCTCGGG
CTTTCCCGCT ACCAGCGTTT TCGCCTCGTC GTCTTTCCGC AGGCAATCCG CGTCATCCTG
CCGCCGCTGG GCAACGATTT CGTGGCCATG GTCAAGGATT CCTCGCTCGT CTCGGTGCTC
GGCGTCGCCG ACGTGACCCA GATGGGCAAG ATCTATGCCT CGGGATCCTT CCGCTTTTTC
GAGACCTACT CCATCGTTGC CTATGTCTAT CTCGTGCTGA CGATAGGGCT TTCACTGGCG
CTAAGGGCTG TCGAGCAGCG TCTGAGGCGG TCGCAAGTCC GCTAA
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| Protein sequence | MTPVQSSDTP SQKGDYPWWL IALILIAAAL ALVIAANDIF TQVFTVVLKG LGVTVFVTLV
GFVLATLLGL GVALMALSGH VALRQIARFY TEVIRGVPIL VLLFYIAFVG APALVTAANF
VAAPLISAGW MEAFVVRDVS LMWRAIIALM IGYSAFIAEV FRAGIQSVDK GQVEAAKALG
LSRYQRFRLV VFPQAIRVIL PPLGNDFVAM VKDSSLVSVL GVADVTQMGK IYASGSFRFF
ETYSIVAYVY LVLTIGLSLA LRAVEQRLRR SQVR
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