| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3099 |
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| Symbol | trmD |
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| ID | 5323978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3245086 |
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| End bp | 3245808 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640792049 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001328760 |
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| Protein GI | 150398293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.388944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.776842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCTTTC GTGCAACGGT CCTGACGCTC TATCCCGAAA TGTTCCCCGG ACATCTCGGC
GTTTCGCTCG CCGGAAAGGC ACTGGAGCGC GGGGATTGGT CGATCGAAGC CGTGCAGATA
CGCGACTTCG CCGGCGACAG GCACCGCACG GTAGACGACA CGCCGGCCGG CGGAGGCGCC
GGAATGGTGC TGAAGCCCGA CGTTCTTGCC CGCGCTATCG ACCATGTTTC GGCAGATGAC
GAGCGACCGC GGCTTCTGAT GAGCCCGCGC GGGCGGCCGC TGACGCAGGA ACGGGTGCGC
GCGCTGGCCG CCGGTCCCGG CGTCGTCGTC GTTTGCGGCC GTTTCGAGGG TGTCGATCAG
CGGGTCATCG ATACGCGCCA GCTGGAGGAA GTCTCGATCG GCGACTACAT TCTTTCCGGC
GGCGAACCGG CGGCACTGGT CCTGCTGGAC GCGGTGGTGC GCATTCTGCC GGGCGTCATG
GGAAACGAAC TCTCGGGCGT GCACGAGAGC TTCGAAGGAG GGTTGCTGGA GCATCCCCAC
TACACGCGTC CCCAGGTCTT CGAGGGTCAA GAAATACCAG CCGTGCTCAC GTCAGGCAAT
CACGCCGCTA TAGCCCAATG GCGATTGGTC GCCGCCCGCC GGCTGACCGC CGAGCGCCGG
CCGGACCTCC TGGAGCGTGA TCTGAAACCG CAGCCTGATC CGGCTCAACC CGTGAAGAAG
TAA
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| Protein sequence | MLFRATVLTL YPEMFPGHLG VSLAGKALER GDWSIEAVQI RDFAGDRHRT VDDTPAGGGA
GMVLKPDVLA RAIDHVSADD ERPRLLMSPR GRPLTQERVR ALAAGPGVVV VCGRFEGVDQ
RVIDTRQLEE VSIGDYILSG GEPAALVLLD AVVRILPGVM GNELSGVHES FEGGLLEHPH
YTRPQVFEGQ EIPAVLTSGN HAAIAQWRLV AARRLTAERR PDLLERDLKP QPDPAQPVKK
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