| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3092 |
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| Symbol | |
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| ID | 5323971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3238468 |
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| End bp | 3239742 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792042 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001328753 |
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| Protein GI | 150398286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.852601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGGCG TCGAGGTCAT AACCTTCGGC TGCCGTCTGA ACACCTACGA ATCGGAAGTG
ATGCGGGCAG AGGCCGAAAA GGCGGGGCTG AACAATGCCG TGCTCGTCAA CACCTGCGCC
GTGACCGCCG AGGCGGTGCG CCAGGCGCGC CAGGCCATCC GCCGCGCGCG GCGCGAGAAC
CCGCACGCCC GTATCATCGT CACCGGCTGC GCCGCGCAGA CCGAGAAGGA AACTTTCGCG
GAGATGGCGG AGGTGGACGC GGTTCTCGGC AATGAGGAGA AGCTCACGAG CGCTTCCTAT
CGCTCGCTGC CCGATTTCGG CGTCTCGGCC GAGGAGAAAC TCCGGGTGAA CGATATCATG
AGCGTGCGCG CCACCGCGCC GCAAATGGTG AAGCATATCG ACGGGCACGT GCGTGCCTTC
ATCCAGGTGC AGAATGGCTG TGATCATCGC TGCACCTTCT GCATCATCCC TTATGGACGC
GGCAATTCCC GCTCGGTGCC GATGGGCGCC GTCGTCGACC AGGCGAGACG CCTTGTCGAG
GGCGGCTATC GCGAGATCGT GCTGACCGGC GTCGATGCCA CCAGCTACGG CGCCGACCTG
CCCGGAACGC CAACCCTCGG ACTTCTCGCC AAGACCTTGC TGAAGCAGGT CCCGGAGATC
CTTCGTCTAC GGCTTTCCTC CATCGACAGC ATCGAGGCGG ACGTCCATCT TCTCGATCTC
ATTGCCGAAG AGCCGCGTTT CATGCCGCAT CTGCATCTCT CGCTGCAGCA TGGCGACGAC
CTGATGCTGA AGCGGATGAA GCGGCGGCAT TCAAGTGCCG ACGCGCGCGC CTTCTGCGCG
GAGGTCCTTC GGCTCCGACC CGAAATCAGT TTCAGCGCCG ACATGATCGC CGGCTTTCCG
ACCGAGACCG AGGCGATGTT CCAGAATGCC GTCAGGCTTG CTGAGGATTG CGGCCTTGCG
CATCTGCACG TCTTCCCCTA CAGCCCACGC CCCGGCACGC CGGCGGCCCG CATGCCGCAG
CTCGACCGCG TGCTCGTCAA AGAGCGTGCC GCACGCCTGC GTGCAAAGGG CGCCGAGCTC
CATACGGTCC ATCTCGAACG CATGGTCGGC AGCAGGCAAA TGGTGCTGGT GGAGATGAAC
GGTCTGGCAC ATACCGAAAA CTTCACGCTC GTCGATGCGG CCGGCCTCGA GCCGCGATCG
CTCGTTGCGG CCGAAATCAC CGGCCATAAC GGCAAGCATC TGACGATCAA GCGCAAACAG
ATGGCTGCGG CCTGA
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| Protein sequence | MSGVEVITFG CRLNTYESEV MRAEAEKAGL NNAVLVNTCA VTAEAVRQAR QAIRRARREN
PHARIIVTGC AAQTEKETFA EMAEVDAVLG NEEKLTSASY RSLPDFGVSA EEKLRVNDIM
SVRATAPQMV KHIDGHVRAF IQVQNGCDHR CTFCIIPYGR GNSRSVPMGA VVDQARRLVE
GGYREIVLTG VDATSYGADL PGTPTLGLLA KTLLKQVPEI LRLRLSSIDS IEADVHLLDL
IAEEPRFMPH LHLSLQHGDD LMLKRMKRRH SSADARAFCA EVLRLRPEIS FSADMIAGFP
TETEAMFQNA VRLAEDCGLA HLHVFPYSPR PGTPAARMPQ LDRVLVKERA ARLRAKGAEL
HTVHLERMVG SRQMVLVEMN GLAHTENFTL VDAAGLEPRS LVAAEITGHN GKHLTIKRKQ
MAAA
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