Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3091 |
Symbol | |
ID | 5323970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3236887 |
End bp | 3238449 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792041 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_001328752 |
Protein GI | 150398285 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.694563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATTG GTTTCATCAA GAAGATCTTC TCCTTCGGCA AGGACGCCGT CGACGAGAAA CCCGCGCCGC CGCAGGAGGT TTCGGATGCC GCACCCTCTT CTGTGCCCTC AGGAGAGCAG GGTGAGAGCC AGGCACCGGT CGAGGAAAAG CGTACCGCGG CCGAGGCAAC GGAAGCTGGC ACAGACGATC GCGATGTCTC CCTCGCACCA AGCACGGCAA ACACCGAAAC CACGAGCGAC GAAGCCCCGG CAGGTACTGC TCCCGCAGCA GATGAGAACA CCGTGAAGCA GGACGAGAGC GTCCCGCATC CGATCTCTCC CCTCGCGGGG GAGATGCCCG GCAGGGCAGA GGAGAGCGAG CCTCCTTCCG AACACCCAAC GGGAGCCGAT GACGTTTCGG CACCCTCCTC CGTCCCTTCG GGACATCTCC CCCTCAACGG GGGAGATCAC GGGGAGACCG AGGCAACCGC TGAGAACAGC GGGGCTCCTG TCGAGCAGGC GGAGGCGCTC GCAGGCGACG CCGATAGGCG GTCAGATGCC GGTTCCGACA TCGAAGCGGA GCTCCGCACA TCCAGCCTTC CCAAAGGTTT CGCCGCCGCC GACAGGCGCC CGAAGGACGA GACCCCGGCG GCGCAGCCGA AGCTCAACTG GTACCAGCGC CTCCGTCTGG GTCTCGCCCG CACCTCGTCG CAGCTCACCG GTCAGATCGC CAGTCTCTTC ACCAAACGCA AGCTGGACGA GGCGACGCTG CAGGACCTCG AAGATCTCCT GATCCAGGCG GATCTCGGCG TCGAGACCGC GATGCGCATC ACCGACGCGC TCGCCTCGGA GCGTTACGGC AAGGATGTGT CCGGCGAGGA CGTATCGCGC ATCATGGCGG GGGAGATCAC CAAAGTGCTG GCGCCGGTCG CAAAGCCGCT CGAACTCGAT CTCAATCATA AGCCGCATGT GATCCTGGTC GTCGGCGTCA ACGGGACAGG AAAGACCACG ACGATCGGCA AGCTTGCTGC GAAACTGTCC GGCGCGGGCC TCAAGGTCAT GATGGCCGCC GGCGACACTT TCCGGGCTGC GGCGATCGAA CAGCTGAAGA TCTGGGCCGA GCGGACGAGG TCCGAAATCG TCTCCTCCAA GCTCGGAGCC GACGCGGCCG GGCTGGCCTA TGAGGCGTTC CAGCGTGCCC GCGAGCAGAA GGCGGACGTG CTGATCATAG ACACCGCCGG GCGATTGCAG AACAAGGCCG AGCTGATGGC GGAACTGGAG AAGATCGTAC GCGTTCTCGG GAAGCTCGAT CCGGACGCGC CGCATACGGT CCTGCAGACA CTGGATGCCA CGACCGGGCA GAACGCGCTG CAGCAGGTAG AGATATTCCG CAACGTTGCG GGCGTCAGCG GATTGATCAT GACAAAGCTC GACGGGACGG CGCGCGGCGG AATCCTGGTG GCGATCTCCG CCAAGCACAA GCTGCCGGTC TATTTCATCG GTGTCGGCGA GGGTGTCGAC GATCTCGAAC CCTTCGAGGC AAAAGACTTC GCCGAGGCGA TCGCCGGTGT TGCGGCCCCA TGA
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Protein sequence | MAIGFIKKIF SFGKDAVDEK PAPPQEVSDA APSSVPSGEQ GESQAPVEEK RTAAEATEAG TDDRDVSLAP STANTETTSD EAPAGTAPAA DENTVKQDES VPHPISPLAG EMPGRAEESE PPSEHPTGAD DVSAPSSVPS GHLPLNGGDH GETEATAENS GAPVEQAEAL AGDADRRSDA GSDIEAELRT SSLPKGFAAA DRRPKDETPA AQPKLNWYQR LRLGLARTSS QLTGQIASLF TKRKLDEATL QDLEDLLIQA DLGVETAMRI TDALASERYG KDVSGEDVSR IMAGEITKVL APVAKPLELD LNHKPHVILV VGVNGTGKTT TIGKLAAKLS GAGLKVMMAA GDTFRAAAIE QLKIWAERTR SEIVSSKLGA DAAGLAYEAF QRAREQKADV LIIDTAGRLQ NKAELMAELE KIVRVLGKLD PDAPHTVLQT LDATTGQNAL QQVEIFRNVA GVSGLIMTKL DGTARGGILV AISAKHKLPV YFIGVGEGVD DLEPFEAKDF AEAIAGVAAP
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