Gene Smed_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3091 
Symbol 
ID5323970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3236887 
End bp3238449 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content65% 
IMG OID640792041 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_001328752 
Protein GI150398285 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.694563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTG GTTTCATCAA GAAGATCTTC TCCTTCGGCA AGGACGCCGT CGACGAGAAA 
CCCGCGCCGC CGCAGGAGGT TTCGGATGCC GCACCCTCTT CTGTGCCCTC AGGAGAGCAG
GGTGAGAGCC AGGCACCGGT CGAGGAAAAG CGTACCGCGG CCGAGGCAAC GGAAGCTGGC
ACAGACGATC GCGATGTCTC CCTCGCACCA AGCACGGCAA ACACCGAAAC CACGAGCGAC
GAAGCCCCGG CAGGTACTGC TCCCGCAGCA GATGAGAACA CCGTGAAGCA GGACGAGAGC
GTCCCGCATC CGATCTCTCC CCTCGCGGGG GAGATGCCCG GCAGGGCAGA GGAGAGCGAG
CCTCCTTCCG AACACCCAAC GGGAGCCGAT GACGTTTCGG CACCCTCCTC CGTCCCTTCG
GGACATCTCC CCCTCAACGG GGGAGATCAC GGGGAGACCG AGGCAACCGC TGAGAACAGC
GGGGCTCCTG TCGAGCAGGC GGAGGCGCTC GCAGGCGACG CCGATAGGCG GTCAGATGCC
GGTTCCGACA TCGAAGCGGA GCTCCGCACA TCCAGCCTTC CCAAAGGTTT CGCCGCCGCC
GACAGGCGCC CGAAGGACGA GACCCCGGCG GCGCAGCCGA AGCTCAACTG GTACCAGCGC
CTCCGTCTGG GTCTCGCCCG CACCTCGTCG CAGCTCACCG GTCAGATCGC CAGTCTCTTC
ACCAAACGCA AGCTGGACGA GGCGACGCTG CAGGACCTCG AAGATCTCCT GATCCAGGCG
GATCTCGGCG TCGAGACCGC GATGCGCATC ACCGACGCGC TCGCCTCGGA GCGTTACGGC
AAGGATGTGT CCGGCGAGGA CGTATCGCGC ATCATGGCGG GGGAGATCAC CAAAGTGCTG
GCGCCGGTCG CAAAGCCGCT CGAACTCGAT CTCAATCATA AGCCGCATGT GATCCTGGTC
GTCGGCGTCA ACGGGACAGG AAAGACCACG ACGATCGGCA AGCTTGCTGC GAAACTGTCC
GGCGCGGGCC TCAAGGTCAT GATGGCCGCC GGCGACACTT TCCGGGCTGC GGCGATCGAA
CAGCTGAAGA TCTGGGCCGA GCGGACGAGG TCCGAAATCG TCTCCTCCAA GCTCGGAGCC
GACGCGGCCG GGCTGGCCTA TGAGGCGTTC CAGCGTGCCC GCGAGCAGAA GGCGGACGTG
CTGATCATAG ACACCGCCGG GCGATTGCAG AACAAGGCCG AGCTGATGGC GGAACTGGAG
AAGATCGTAC GCGTTCTCGG GAAGCTCGAT CCGGACGCGC CGCATACGGT CCTGCAGACA
CTGGATGCCA CGACCGGGCA GAACGCGCTG CAGCAGGTAG AGATATTCCG CAACGTTGCG
GGCGTCAGCG GATTGATCAT GACAAAGCTC GACGGGACGG CGCGCGGCGG AATCCTGGTG
GCGATCTCCG CCAAGCACAA GCTGCCGGTC TATTTCATCG GTGTCGGCGA GGGTGTCGAC
GATCTCGAAC CCTTCGAGGC AAAAGACTTC GCCGAGGCGA TCGCCGGTGT TGCGGCCCCA
TGA
 
Protein sequence
MAIGFIKKIF SFGKDAVDEK PAPPQEVSDA APSSVPSGEQ GESQAPVEEK RTAAEATEAG 
TDDRDVSLAP STANTETTSD EAPAGTAPAA DENTVKQDES VPHPISPLAG EMPGRAEESE
PPSEHPTGAD DVSAPSSVPS GHLPLNGGDH GETEATAENS GAPVEQAEAL AGDADRRSDA
GSDIEAELRT SSLPKGFAAA DRRPKDETPA AQPKLNWYQR LRLGLARTSS QLTGQIASLF
TKRKLDEATL QDLEDLLIQA DLGVETAMRI TDALASERYG KDVSGEDVSR IMAGEITKVL
APVAKPLELD LNHKPHVILV VGVNGTGKTT TIGKLAAKLS GAGLKVMMAA GDTFRAAAIE
QLKIWAERTR SEIVSSKLGA DAAGLAYEAF QRAREQKADV LIIDTAGRLQ NKAELMAELE
KIVRVLGKLD PDAPHTVLQT LDATTGQNAL QQVEIFRNVA GVSGLIMTKL DGTARGGILV
AISAKHKLPV YFIGVGEGVD DLEPFEAKDF AEAIAGVAAP