Gene Smed_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3080 
Symbol 
ID5323959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3227503 
End bp3227817 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content60% 
IMG OID640792030 
Productregulatory protein ArsR 
Protein accessionYP_001328741 
Protein GI150398274 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA ACGATATATT CAAAGCTCTC GCCGACCCGA CCCGCCGTGC AATCTTCGAG 
AAGCTGGCGA GCGGCAGCAT GAACGCCAGT GCCTTGCGCG ATGGAATGCA CATCAGCCAG
CCGGCCATGT CCCAGCACCT CCACGTGTTG CGTGATGCAA AGCTGGTGCG GGAAGAACGG
CACGGGCGCT TCGTGAACTA CGAGGTCGAC CCGGAGGGGC TGGCGCTCAT AGCCGGATGG
CTGACGAAGT ATCGCGCCTA CTGGCCGGCG CGTATCGATG CGTTGAGAGA CCTGCTGAAG
GACATGGGAC AATGA
 
Protein sequence
MIENDIFKAL ADPTRRAIFE KLASGSMNAS ALRDGMHISQ PAMSQHLHVL RDAKLVREER 
HGRFVNYEVD PEGLALIAGW LTKYRAYWPA RIDALRDLLK DMGQ