Gene Smed_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3079 
Symbol 
ID5323958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3227156 
End bp3227506 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID640792029 
Producthypothetical protein 
Protein accessionYP_001328740 
Protein GI150398273 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG TGAACCCACG CGAACAGGCC GGGCATCTGG TGTTCGAATA TGAACTCGGT 
GCACCGCCCG ATATGGTTTG GCAGGCGATC AGTGTCCCTG AGCTTGTCGA TAGATGGTGG
CCCGAGCGGG AACTGGCCGG TACCGAGCCT GTCTCTACCG CTCCCGGTCA GGAAATCTGC
TACAGGATGC GCGACGACGA ACCTCCCTTT CTCGAGAGTC TCGTGACGTT CCAGATCCGG
CCCAACGCTG ATGGCGGCAC AATCCTTAGA ATTGTCCATG GGCTTGAGGA TGAGCGTCTG
GGCCCGCCGG CTGCGAACAG CAATCAGCCT TGGCTGATGC GCGCCGCCTG A
 
Protein sequence
MNKVNPREQA GHLVFEYELG APPDMVWQAI SVPELVDRWW PERELAGTEP VSTAPGQEIC 
YRMRDDEPPF LESLVTFQIR PNADGGTILR IVHGLEDERL GPPAANSNQP WLMRAA