| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3078 |
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| Symbol | clpP |
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| ID | 5323957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3226503 |
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| End bp | 3227120 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640792028 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001328739 |
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| Protein GI | 150398272 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGAAG CAATGCAACT CGTCCCCATG GTCGTTGAAC AATCCAGCCG AGGCGAGCGC
TCCTTTGACA TCTATTCCCG CCTGCTGCGT GAGAGAATCA TTTTTCTGAA CGGCGAGGTG
AACGATGCCG TATCCGCTCT GGTTTGCGCA CAATTGCTGT TTCTGGAGGC TGAAAGCCCC
ACGAAACCGA TCCAGCTCTA CATCAATTCG CCTGGCGGTG TCGTTACAAG CGGCTTCGCC
ATGTATGACA CGATGCGATA TATCCGAGCG CCGGTTCATA CGCTTTGCAT GGGGACCGCC
CGTTCGATGG GGTCATTCCT GCTGATGGCA GGCGAGGCGG GCGGGCGTGC CGCCCTGCCA
AATACCAGCA TACTTGTCCA TCAGCCTTCA GGCGGCTTCC AGGGGCAGGC ATCCGATATG
CTTATCCATG CCGAGGAAAT CAGGCGAACC AAACACCGAA TGACGCGGCT TTATGCCGAG
CATTGCGGGC GAACCTATGA AGAATTCGAG CGTGCGATGG ATCGCGATCG TTTCATGACG
GCGGAAGAAG CTCTGGAGTG GGGTTTGATC GACTGTATCC TCACCGAACG AGTGGCCGGT
GCTGAACGTG ACGGATAA
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| Protein sequence | MREAMQLVPM VVEQSSRGER SFDIYSRLLR ERIIFLNGEV NDAVSALVCA QLLFLEAESP
TKPIQLYINS PGGVVTSGFA MYDTMRYIRA PVHTLCMGTA RSMGSFLLMA GEAGGRAALP
NTSILVHQPS GGFQGQASDM LIHAEEIRRT KHRMTRLYAE HCGRTYEEFE RAMDRDRFMT
AEEALEWGLI DCILTERVAG AERDG
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