Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3076 |
Symbol | |
ID | 5323955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3225083 |
End bp | 3225820 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640792026 |
Product | hypothetical protein |
Protein accession | YP_001328737 |
Protein GI | 150398270 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATC TGAGAAACTA CCAAACCCGA ATGTCGCCCG CCGGCGCTCA GGCGGGTGCC GTGATCGACG AAGGCCTTCG CGCTTATATG CTGAAGGTCT ACAACCTGAT GGCCCTCGGC CTGGCGATCA CAGGCGTGGC AGCTTACGGA ACCTATGCGC TTGCCGCCTC TAATCCGGCA TTCGCCCAGC TTATCTACGC TTCGCCTCTC AAGTGGGTCG TGATGCTGGC GCCGCTTGCG CTGGTTTTCT TCCTGAGCTT CCGCATCAAT TCCATGAGCG TTGCCACGGC GCAGATGACG TTCTGGGTCT ATGCGGCGCT GATGGGCCTG TCGCTCTCGT CGATCTTCCT GGTCTTCACC GGCCAGAGCA TCGTGCAGAC CTTCTTCGTA ACGGCGGCTT CGTTCGGCGC CCTGTCGCTT TACGGCTACA CGACGAAGAA GGATCTCTCC GGTCTCGGCT CGTTCCTGAT CATGGGTCTG TTCGGCGTGA TCATCGCATC CGTCGTCAAC ATCTTCCTAG CCTCTTCGGC ACTCGGCTTC GCGATCTCGG TGATCGGCGT GCTTATCTTC GCCGGCCTGA CCGCGTACGA CACGCAGAAG CTCAAGGAAA TGTATTTCGA AGGCGATGAT GCGCTGGTCG CCGGCCGCAA GGCCATCATG GGCGCGCTGA CACTGTATCT CGACTTCATC AACCTGTTCA TGTTCATGCT GCAGTTCCTT GGCAACAGGA ACGAGTAG
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Protein sequence | MADLRNYQTR MSPAGAQAGA VIDEGLRAYM LKVYNLMALG LAITGVAAYG TYALAASNPA FAQLIYASPL KWVVMLAPLA LVFFLSFRIN SMSVATAQMT FWVYAALMGL SLSSIFLVFT GQSIVQTFFV TAASFGALSL YGYTTKKDLS GLGSFLIMGL FGVIIASVVN IFLASSALGF AISVIGVLIF AGLTAYDTQK LKEMYFEGDD ALVAGRKAIM GALTLYLDFI NLFMFMLQFL GNRNE
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