Gene Smed_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3076 
Symbol 
ID5323955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3225083 
End bp3225820 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content59% 
IMG OID640792026 
Producthypothetical protein 
Protein accessionYP_001328737 
Protein GI150398270 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TGAGAAACTA CCAAACCCGA ATGTCGCCCG CCGGCGCTCA GGCGGGTGCC 
GTGATCGACG AAGGCCTTCG CGCTTATATG CTGAAGGTCT ACAACCTGAT GGCCCTCGGC
CTGGCGATCA CAGGCGTGGC AGCTTACGGA ACCTATGCGC TTGCCGCCTC TAATCCGGCA
TTCGCCCAGC TTATCTACGC TTCGCCTCTC AAGTGGGTCG TGATGCTGGC GCCGCTTGCG
CTGGTTTTCT TCCTGAGCTT CCGCATCAAT TCCATGAGCG TTGCCACGGC GCAGATGACG
TTCTGGGTCT ATGCGGCGCT GATGGGCCTG TCGCTCTCGT CGATCTTCCT GGTCTTCACC
GGCCAGAGCA TCGTGCAGAC CTTCTTCGTA ACGGCGGCTT CGTTCGGCGC CCTGTCGCTT
TACGGCTACA CGACGAAGAA GGATCTCTCC GGTCTCGGCT CGTTCCTGAT CATGGGTCTG
TTCGGCGTGA TCATCGCATC CGTCGTCAAC ATCTTCCTAG CCTCTTCGGC ACTCGGCTTC
GCGATCTCGG TGATCGGCGT GCTTATCTTC GCCGGCCTGA CCGCGTACGA CACGCAGAAG
CTCAAGGAAA TGTATTTCGA AGGCGATGAT GCGCTGGTCG CCGGCCGCAA GGCCATCATG
GGCGCGCTGA CACTGTATCT CGACTTCATC AACCTGTTCA TGTTCATGCT GCAGTTCCTT
GGCAACAGGA ACGAGTAG
 
Protein sequence
MADLRNYQTR MSPAGAQAGA VIDEGLRAYM LKVYNLMALG LAITGVAAYG TYALAASNPA 
FAQLIYASPL KWVVMLAPLA LVFFLSFRIN SMSVATAQMT FWVYAALMGL SLSSIFLVFT
GQSIVQTFFV TAASFGALSL YGYTTKKDLS GLGSFLIMGL FGVIIASVVN IFLASSALGF
AISVIGVLIF AGLTAYDTQK LKEMYFEGDD ALVAGRKAIM GALTLYLDFI NLFMFMLQFL
GNRNE