Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3067 |
Symbol | |
ID | 5323946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3215539 |
End bp | 3216492 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792017 |
Product | hypothetical protein |
Protein accession | YP_001328728 |
Protein GI | 150398261 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGC TTCTCATCGC GCTTGCCGCC ACGGTCGCGC TTTCACTGCC GGCACGCGCC GACGAGGTCA CGGTCGCCGT GACGGCAATC GTCGAACATC CGGCGCTCGA TGCCGCCCGC GACGGCGTCA AGGATGCGCT GGCCGCCGCT GGCTACAAGG AAGGCGAGAA CCTCAAGTTC ATCTACGAGT CGGCGCAGGG CAATCCGGCG ACTGCTGCGC AGATCGCCCG CCAGTTCGCC GGTGAAGCCC CGAACGTGAT CGTGCCGATT TCCACCCCGT CGGCCCAGGC CGTCGTTTCC TCCACCCGCG ATATCCCCGT TGTTTTCACC GCCGTTTCCG ATCCGCTGGG CGCGCAGCTC GTGAAGGATA TGGAGAAGCC CGGCGGCAAC GTCACCGGTC TTTCCGACCT GTCCCCGGTT GCCGAGCACG TGGCGCTGAT CAAGGAGATC CTGCCGAACG TCAAGACGAT CGGCTTTCTC TACAATTCGG GCGAGGCGAA TTCCGTATCG CTGCTGGCGG TTCTCAAGGA AGAGGCTGAA AAGGCCGGCC TGAGCGTGAT CGAATCCGCC GCGACGAAAT CGGCCGAGGT TCAGGGGGCG GCTCGTGCGC TCGTCGGCCG CGCCGACGTG ATCTACATTC CGACGGACAA CACCATCATC TCCGCGCTCG AAGGCGCCGT TGCGGTCGCC GAGGAAAGTA AGCTGCCGCT TTTCACCGCC GACACCGATT CCGTTTCCCG TGGCGCCGTC GCGGCGCTCG GTTTCAATTA CTATGATGTC GGCAAACAGA CCGGCGAGGT GGTTGTCCGT GTCCTCAAGG GCGAAAACCC CGGCGACATT GCCGTCAAGG TTGCGGCCGG AACCGACCTC GTGATCAACA AGGGCGCCGC CACCCGCATG GGGATCACCC TGCCGGAGAG CGTCGTCGGC CGGGCGACCC GCACGATCGA ATAA
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Protein sequence | MRSLLIALAA TVALSLPARA DEVTVAVTAI VEHPALDAAR DGVKDALAAA GYKEGENLKF IYESAQGNPA TAAQIARQFA GEAPNVIVPI STPSAQAVVS STRDIPVVFT AVSDPLGAQL VKDMEKPGGN VTGLSDLSPV AEHVALIKEI LPNVKTIGFL YNSGEANSVS LLAVLKEEAE KAGLSVIESA ATKSAEVQGA ARALVGRADV IYIPTDNTII SALEGAVAVA EESKLPLFTA DTDSVSRGAV AALGFNYYDV GKQTGEVVVR VLKGENPGDI AVKVAAGTDL VINKGAATRM GITLPESVVG RATRTIE
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