Gene Smed_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3067 
Symbol 
ID5323946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3215539 
End bp3216492 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content65% 
IMG OID640792017 
Producthypothetical protein 
Protein accessionYP_001328728 
Protein GI150398261 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGC TTCTCATCGC GCTTGCCGCC ACGGTCGCGC TTTCACTGCC GGCACGCGCC 
GACGAGGTCA CGGTCGCCGT GACGGCAATC GTCGAACATC CGGCGCTCGA TGCCGCCCGC
GACGGCGTCA AGGATGCGCT GGCCGCCGCT GGCTACAAGG AAGGCGAGAA CCTCAAGTTC
ATCTACGAGT CGGCGCAGGG CAATCCGGCG ACTGCTGCGC AGATCGCCCG CCAGTTCGCC
GGTGAAGCCC CGAACGTGAT CGTGCCGATT TCCACCCCGT CGGCCCAGGC CGTCGTTTCC
TCCACCCGCG ATATCCCCGT TGTTTTCACC GCCGTTTCCG ATCCGCTGGG CGCGCAGCTC
GTGAAGGATA TGGAGAAGCC CGGCGGCAAC GTCACCGGTC TTTCCGACCT GTCCCCGGTT
GCCGAGCACG TGGCGCTGAT CAAGGAGATC CTGCCGAACG TCAAGACGAT CGGCTTTCTC
TACAATTCGG GCGAGGCGAA TTCCGTATCG CTGCTGGCGG TTCTCAAGGA AGAGGCTGAA
AAGGCCGGCC TGAGCGTGAT CGAATCCGCC GCGACGAAAT CGGCCGAGGT TCAGGGGGCG
GCTCGTGCGC TCGTCGGCCG CGCCGACGTG ATCTACATTC CGACGGACAA CACCATCATC
TCCGCGCTCG AAGGCGCCGT TGCGGTCGCC GAGGAAAGTA AGCTGCCGCT TTTCACCGCC
GACACCGATT CCGTTTCCCG TGGCGCCGTC GCGGCGCTCG GTTTCAATTA CTATGATGTC
GGCAAACAGA CCGGCGAGGT GGTTGTCCGT GTCCTCAAGG GCGAAAACCC CGGCGACATT
GCCGTCAAGG TTGCGGCCGG AACCGACCTC GTGATCAACA AGGGCGCCGC CACCCGCATG
GGGATCACCC TGCCGGAGAG CGTCGTCGGC CGGGCGACCC GCACGATCGA ATAA
 
Protein sequence
MRSLLIALAA TVALSLPARA DEVTVAVTAI VEHPALDAAR DGVKDALAAA GYKEGENLKF 
IYESAQGNPA TAAQIARQFA GEAPNVIVPI STPSAQAVVS STRDIPVVFT AVSDPLGAQL
VKDMEKPGGN VTGLSDLSPV AEHVALIKEI LPNVKTIGFL YNSGEANSVS LLAVLKEEAE
KAGLSVIESA ATKSAEVQGA ARALVGRADV IYIPTDNTII SALEGAVAVA EESKLPLFTA
DTDSVSRGAV AALGFNYYDV GKQTGEVVVR VLKGENPGDI AVKVAAGTDL VINKGAATRM
GITLPESVVG RATRTIE