Gene Smed_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3057 
Symbol 
ID5323936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3206770 
End bp3207318 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content65% 
IMG OID640792007 
Producthypothetical protein 
Protein accessionYP_001328718 
Protein GI150398251 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA AGGCGTCCGC AAGGAGATCG AGACCATCAA CCGTCGTCGT GAAAACCGCC 
CCGCGCGACC GCCGGCGCGC GCTCGTGCTT TTCGACGGAC ACGCGGAACA GGCCGCGATC
GGACGAAACG GCATTACGGC GTTCAAGCGC GAAGGCGACG GGGCGACCCC GCGCGCGGCA
ATGCGGCTCA TCGGCGGCTA CATACGGCGC GACCGCGTAT CCTTACCCCC GACGCGCCTG
CCGATGCGGA GCGTCCGGCG TGACATGCTC TGGTGCGACG CTCCGCAACA CGCGTGCTAC
AATCGCCCGG TCAGGGCGCC TTTTCAGGCG GGACATGAAA GCATGATGCG CGAGGATGGG
CTCTATGACA TCTGCCTCGT CATGGACTGG AACGTCTCCT GCCGCAGGCG CAATGCGGGC
TCGGCCATTT TCTTCCACCT CATCCGCCCC GGTTACGAGC CGACCGAAGG CTGTGTCGCG
ATCAGTCTGA CGGCGATGCG GCGACTGATC CGGAACATGC ACCGCCGCAC GATCGTGAAG
GTCGTGTAG
 
Protein sequence
MRKKASARRS RPSTVVVKTA PRDRRRALVL FDGHAEQAAI GRNGITAFKR EGDGATPRAA 
MRLIGGYIRR DRVSLPPTRL PMRSVRRDML WCDAPQHACY NRPVRAPFQA GHESMMREDG
LYDICLVMDW NVSCRRRNAG SAIFFHLIRP GYEPTEGCVA ISLTAMRRLI RNMHRRTIVK
VV