Gene Smed_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3052 
Symbol 
ID5323931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3200862 
End bp3203534 
Gene Length2673 bp 
Protein Length890 aa 
Translation table11 
GC content64% 
IMG OID640792002 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_001328713 
Protein GI150398246 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAA GCAATCCCGC AACGCTTGAC AGCCGTTCCA ACCGGTTCGT GCTGACCCAC 
TTCGTCTGGC GGCAGATCGC CTCGCTGGCG GGGTTTGTTC TCCTCGGTGG GCTGGCGCTC
GCCATTGCCG CCCTTTCGAC CTGGAACGTC GCGGATCCGA GCTTTTCCTA TGCGACCTCG
AACGAGCCGA CGAACCTGCT CGGCTATGGC GGCGCCGTTT TCGCGGATAT TTTCATGCAG
TTCTTCGGCC TTGCGAGTGT CGTGGCGCTG CTTCCGGCCG TCGCCTGGGC CATTGTCCTC
ATCCGCGGCA CGCATTTTGA CAAGATCCTC AAGCGGCTCG GCCTGTGGTT CGCGGGCTCG
GTCCTTGCCA GCGCGGCCCT GAGCTGCGTA CCGGCGCCGA TCACCTGGCC GCTTCCGAAC
GGCCTCGGAG GCGTCTTCGG CGATATGATC CTGCGTTTTC CCGCGCTCTT TACCGGAACC
TTCCCGACGG GCACCCTTGC GACCGTCCTC GCCTGCCTTT TCGCCGCGCC CGCCGCCTGG
TGCCTCATCT ACAGCGCCGG CCTTATCGGG GTCAGCGAGG AGGATGAAGT TGACTCCGCG
CCGGAGCCCG CACCCAGCAA GGCCCGCACC ATACGCGACG AACTCGAGGA AGACGACGAA
GGGGGGCCGC TTACCGTGCT GATGGGCTCG CTGGCCCATA TTCGCTACAC GGCGCAGGCC
AGGCTTCGCC GCGCCTTCGG CATGAAAGGC AAGCCGGCGA AGCGTCACTA CGACGAACCC
TACGACTTCA ACAATGACGA ATTCGGCACG CTGAACGAGC CGGTCCGGCC GAAGGCTCAG
ACGGGTGGCG GGCGAATCGA ACCCTCGCTC GATCGATCCG AGCGCCGCAT CGTCACACCG
CCGCCGATGA TGAGCGACGA TAACGAACCG CCCTTCGATA TCGACGAGCG CCGTGCCGCC
GGCATCCTGC CCGCCGGCAT CCTGCCGGAC GACGAGGAAG ACGATGGAGC CGCCGACTGG
GCTCCAAGAC CCGCACCGCC GAGACCCGCT CCGGCCATTG CAGGTTCGCG TGTTGCCCCG
CCGCCGGTGC GGCCGAAAAG CGGCCAGCGC ATCGAGCGCG AGGCACAGCG CTCCTTCGTC
GATGACGACG GCGATTTCAC GCTCCCACCG ATCCATTTCC TGGCCGAACC GAAGAATATC
GCGCGCGACG CCTCGCTTTC GGCCGACGCG CTCGAGCAGA ACGCCCGTAT GCTCGAAGGC
GTTCTCGAGG ATTTCGGCGT AAAAGGCGAG ATCATCCATG TTCGCCCCGG CCCCGTCGTA
ACCCTCTACG AGCTGGAACC CGCGCCCGGG ATCAAATCGT CGCGCGTCAT CGGGCTCGCC
GACGACATCG CCCGTTCGAT GAGCGCTATC GCCGCACGCG TCGCCGTCGT GCCCGGCCGC
AATGCGATCG GTATCGAACT GCCAAACCAG CGGCGCGAGA TGGTCTATCT TCGCGAGCTC
ATCGGCTCCC GTGACTTCGA GACGACCAAA ACCAAGCTGG CAATGGCGCT CGGCAAGACG
ATCGGCGGCG AATCCGTGGT CGCCGATCTC GCGAAGATGC CGCATCTTCT CGTCGCAGGC
ACCACCGGCT CGGGCAAATC CGTGGCGATC AACACCATGA TCCTGTCGCT GCTCTATCGC
CTGAGGCCCG ATCAGTGCCG TCTCATCATG ATCGACCCCA AGATGCTCGA GCTTTCCGTC
TATGACGGCA TTCCGCATCT CCTCTCGCCG GTCGTGACCG ACCCGAAGAA AGCGGTCGTG
GCGCTGAAAT GGACCGTGCG CGAGATGGAA GAGCGCTACA AGAAGATGTC GAAGATCGGC
GTGCGCAACA TCGACGGCTT CAACAGCCGA GTCGAACAGG CGCTGGCCAA GGGTGAGGCG
ATCACCCGCA CCGTTCAGAC CGGCTTCGAC CGCCAGACCG GCGAAGCGAT CTACGAAACG
GAGGAATTCG ACCTCTCGCC CATGCCCTAT ATCGTCGTCA TCATCGACGA GATGGCCGAT
CTGATGATGG TCGCCGGCAA GGACATCGAA GGTGCCGTCC AGCGCCTCGC TCAGATGGCG
CGTGCCGCCG GCATCCACGT GATCATGGCG ACGCAGCGGC CATCGGTCGA CGTCATAACC
GGCACGATCA AGGCAAACTT CCCGACCCGG ATCTCTTTCC AGGTGACCTC GAAAATCGAC
AGCCGCACCA TCCTGGGCGA ACAGGGTGCG GAGCAACTGC TCGGCATGGG CGACATGCTC
TATATGGCCG GCGGCGGCCG TATCCAGCGC GTGCATGGGC CCTTCGTCTC CGACACTGAG
GTAGAAGAGG TCGTCGCCTA TCTGAAGACG CAAGGCGTGC CGCAATATCT CGACGCAATC
ACAGAGGACG ATGACGACGA GAACGAGGGC GGCGGACCGG CCGGCACTTC CAACCTCGCC
GACTCCGAGG ATCCTTACGA CCAGGCGGTC GCGATCGTGC TGCGCGACGG CAAGGCTTCG
ACCTCCTATG TGCAGCGACG CCTCGGAATC GGCTATAATA GGGCCGCCTC GCTGATTGAA
CGCATGGAAC AGGAGGGCAT AATCAGCCCT GCCAACCACG CCGGCAAACG CGAAATACTG
GTGCCGACCG AGGCTGAAAT CACCGGCCGA TGA
 
Protein sequence
MSRSNPATLD SRSNRFVLTH FVWRQIASLA GFVLLGGLAL AIAALSTWNV ADPSFSYATS 
NEPTNLLGYG GAVFADIFMQ FFGLASVVAL LPAVAWAIVL IRGTHFDKIL KRLGLWFAGS
VLASAALSCV PAPITWPLPN GLGGVFGDMI LRFPALFTGT FPTGTLATVL ACLFAAPAAW
CLIYSAGLIG VSEEDEVDSA PEPAPSKART IRDELEEDDE GGPLTVLMGS LAHIRYTAQA
RLRRAFGMKG KPAKRHYDEP YDFNNDEFGT LNEPVRPKAQ TGGGRIEPSL DRSERRIVTP
PPMMSDDNEP PFDIDERRAA GILPAGILPD DEEDDGAADW APRPAPPRPA PAIAGSRVAP
PPVRPKSGQR IEREAQRSFV DDDGDFTLPP IHFLAEPKNI ARDASLSADA LEQNARMLEG
VLEDFGVKGE IIHVRPGPVV TLYELEPAPG IKSSRVIGLA DDIARSMSAI AARVAVVPGR
NAIGIELPNQ RREMVYLREL IGSRDFETTK TKLAMALGKT IGGESVVADL AKMPHLLVAG
TTGSGKSVAI NTMILSLLYR LRPDQCRLIM IDPKMLELSV YDGIPHLLSP VVTDPKKAVV
ALKWTVREME ERYKKMSKIG VRNIDGFNSR VEQALAKGEA ITRTVQTGFD RQTGEAIYET
EEFDLSPMPY IVVIIDEMAD LMMVAGKDIE GAVQRLAQMA RAAGIHVIMA TQRPSVDVIT
GTIKANFPTR ISFQVTSKID SRTILGEQGA EQLLGMGDML YMAGGGRIQR VHGPFVSDTE
VEEVVAYLKT QGVPQYLDAI TEDDDDENEG GGPAGTSNLA DSEDPYDQAV AIVLRDGKAS
TSYVQRRLGI GYNRAASLIE RMEQEGIISP ANHAGKREIL VPTEAEITGR