| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3045 |
|---|
| Symbol | |
|---|
| ID | 5323924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3194321 |
|---|
| End bp | 3195313 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791995 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001328706 |
|---|
| Protein GI | 150398239 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTA GCGACAATCC CTATCAAGGT TCCTTCGGCA GCCAGATGAC GGGCTCGGCT
TCCTTCGGTG TACGGCCGGA AAGCGCCGCG GGCGGTCCGA ACGGCTTGAT CCCGGACGAC
CTGATCAGGG AGACGACGAC CGCCGCCTTC AGTCGCGACG TGCTCGAGGC ATCCCGCCAG
CAGCCGGTTC TCGTCGATTT CTGGGCGCCT TGGTGTGGTC CATGCAAGCA ACTGACCCCG
GTCATCGAAA AGGTGGTGAA GGAAGCCGCC GGCCGGGTGA AGCTCGTCAA GATGAACATC
GACGATCATC CCTCGATTGC GGGCCAGCTC GGTATTCAGT CCATTCCCGC AGTGATCGCC
TTCGTCGACG GCCGACCGGT TGATGGTTTC ATGGGGGCCG TGCCCGAAAG CCAGATCAAG
GAGTTCATCG ACCGCATCGC CGGCCCGGGC ACAGACGACG CAACGGCCGA GATCGAGAAT
GTGCTTGGGG AAGCCAGGGC GCTGCTCGAT GCAGGCGACG CGCAGAACGC CGCCGGCCTC
TACGGTGCGG TCCTGCAGGC GGATCCGGAG AATGCCACGG CAGTAGCCGG GATGATCGAA
TGCATGATCG CGCTCGGGCA GCTCGCCGAG GCACGCCAGG CGCTTTCCGG CTTGCCGGAG
GCGCTCGCCA ATGAAGCGTC CGTCGCTGCC GTCTCGAAAA AGCTCGACCA GATCGAGGAG
GCCCGCAAGC TCGGTGACCC GACGGCGCTC GAGCGTCAGC TCGCGCTCGA TCCGGATGAC
CACGGCGCAC GGCTCAAGCT TGCCAAGATC CGCAATGTGG AGGGCGACCG GGCCGCCGCC
GCCGAACACC TCCTGACCAT CATGAAGCGC GACCGCAGCT TCGAGGACGA CGGCGCCCGG
CGCGAACTGC TGTCGTTCTT CGAGGTATGG GGGCCGAAGG ATCCGGCAAC GATCGCGGCA
CGGCGCAAGC TGTCGTCGAT TCTCTTTTCG TAA
|
|---|
| Protein sequence | MSGSDNPYQG SFGSQMTGSA SFGVRPESAA GGPNGLIPDD LIRETTTAAF SRDVLEASRQ
QPVLVDFWAP WCGPCKQLTP VIEKVVKEAA GRVKLVKMNI DDHPSIAGQL GIQSIPAVIA
FVDGRPVDGF MGAVPESQIK EFIDRIAGPG TDDATAEIEN VLGEARALLD AGDAQNAAGL
YGAVLQADPE NATAVAGMIE CMIALGQLAE ARQALSGLPE ALANEASVAA VSKKLDQIEE
ARKLGDPTAL ERQLALDPDD HGARLKLAKI RNVEGDRAAA AEHLLTIMKR DRSFEDDGAR
RELLSFFEVW GPKDPATIAA RRKLSSILFS
|
|---|
| |