Gene Smed_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3044 
Symbol 
ID5323923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3193751 
End bp3194260 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content58% 
IMG OID640791994 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_001328705 
Protein GI150398238 
COG category[S] Function unknown 
COG ID[COG3760] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG CAGAGCCGAA GACGGCGGAG GACCTGTTCC GTTTTCTGGA CGAACTCGGA 
ATCGAACACA GGACGACGCG GCACGCGCCG GTCTTTACCG TCGCCGAGTC GGTGGCGCTG
CGCGATGAAA TCCCCGGCGG ACATACAAAA AACCTGTTCC TGAAGGACAA AAAGGACAAT
TATTTCCTTC TAACCGTCGA GGAGCACGCA ACGGTGGACC TGAAGGCCGT TCACCAGATC
ATCGGCGCGG CAAGCAAGGT TTCCTTCGGC AGATCGGAGA AGCTGATGGA GTATCTGGGC
GTGATACCGG GCGCCGTCAC CGCCTTCGGG GCGATCAACG ACACCGAAGG CAAGGTGAAG
ATCATTCTCG ACGAGACCCT GATGGCTTTC GACACGATCA ACTGCCATCC GCTCTCGAAC
GACCAGACGA CCTCGATCGC GTCGAAGGAC ATGCTGCGCT TCATGGAAGC GACAGGACAC
GAGCCGCTTG TCTTGAAAGT AACGGCCTGA
 
Protein sequence
MSKAEPKTAE DLFRFLDELG IEHRTTRHAP VFTVAESVAL RDEIPGGHTK NLFLKDKKDN 
YFLLTVEEHA TVDLKAVHQI IGAASKVSFG RSEKLMEYLG VIPGAVTAFG AINDTEGKVK
IILDETLMAF DTINCHPLSN DQTTSIASKD MLRFMEATGH EPLVLKVTA