| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3043 |
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| Symbol | |
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| ID | 5323921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3192219 |
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| End bp | 3193196 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791992 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001328704 |
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| Protein GI | 150398237 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAG ATGATGACGC GCTGATGGTG CGGGCGGCCT GGTTTTACTA TGTCGGCGGC
CTCAACCAGG AAATGACCGC CGCCCGGCTG GGCCTCACCC GTGCCAGGGT CAATAAAATG
CTGGCCGAGG CGCGCGAGAG CGGGCTTGTC AGCATTTCGA TCGACCATCG GCGGGTCGGT
GTCCTGCCGC TCGAGGACAG GCTGCGCACG CGCTTCGGGC TTGATTTCTG CATCTCCACA
CCGGCCTTCG GGTTTCACGA TACGTCCAAG CAAGACAGCG AAGTGCGCAA GCAGATCGCC
TTCCGAGCCG TGGGCGTGGC TGCCGCCAAT CACTTGAAAA CATTGCTTTC CGAGAACGAT
TCCCTGACGG TCGGGACCGG TTGGGGCCGA ACGATCGAAC AGATGACCTT GCATCTGGCC
GGCGTTCGGG CGCCGCATGC GCGCTTCATC TCGATCATGG GGTCGTTGAC GGCAAACAAT
GCCTATAACC CGTTCGAAGT CGTGCACAGC CTCGCGAGAC GCACCGGCGG CGAAGGTTAT
TTTCTTCCGG TGCCCTTCAT CGCCGACTCG GTAGATGACA AAAAGGTCCT CATCTCACAA
CGTTCCGTGG TCAAGGCATT GGAAATCGCC CGCAGTGCTT CCGTCTGCTT CATCAGCGCG
GGTGAATTGA CGGAGGAATC GCTTTTACGG CGCCAGGGCA TGATCAGCGG CACCGAACTC
GAAAGCCTGC GGCAGGCCGG CGCCGTCGGC GACACCAACG GCATTTTCTT CGACAGCGAA
GGGAGGCAGG TCGACCATGA GCTCAACGAA CGGACCATCG CACTGGGTTT CGAAGAGCTG
AAGGCTCTGC CGGTGCTCCT GCTGATCGCC GGCCTGGAGA AAATCCAGGC GGCCCGGGCC
CTGCTTCGCA GCGGCGTCGT CAACGGTCTG ATCATAGACG GCGATGCGGC CGAGGCGTTG
GCAGCGTTGG GCGAATAG
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| Protein sequence | MSEDDDALMV RAAWFYYVGG LNQEMTAARL GLTRARVNKM LAEARESGLV SISIDHRRVG
VLPLEDRLRT RFGLDFCIST PAFGFHDTSK QDSEVRKQIA FRAVGVAAAN HLKTLLSEND
SLTVGTGWGR TIEQMTLHLA GVRAPHARFI SIMGSLTANN AYNPFEVVHS LARRTGGEGY
FLPVPFIADS VDDKKVLISQ RSVVKALEIA RSASVCFISA GELTEESLLR RQGMISGTEL
ESLRQAGAVG DTNGIFFDSE GRQVDHELNE RTIALGFEEL KALPVLLLIA GLEKIQAARA
LLRSGVVNGL IIDGDAAEAL AALGE
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