| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3034 |
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| Symbol | |
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| ID | 5323912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3182547 |
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| End bp | 3183317 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791983 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001328695 |
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| Protein GI | 150398228 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.872247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG CTGACTTCAG GCTGGACGGC AGGCGTGCGG TCGTAACGGG CGCTGCCCGG
GGCATCGGCC GGGCGATCGC CGAACGGCTG GCTGTGGCCG GTGCGCATGT GGTCGTCGCC
GACCGCGAAG AAGCGGAGGG TAATATGGCG GTAGCGTCCA TCGAGGCGGC CGGAGGTAAA
GGCGCTTTCA TTTCTCTGGA CGTCACCGAT CCGGGAGCTG TCGCTCGGGC CGTGGACACC
ATCTATGACG AGTATGGCCC TGTTGACGTT CTGGTCAACA ATGCCGGCAT CGTTCGTAAC
GCGCCTGCTT TGGAGATGAG CCTGGATGAC TGGAAAACGG TGATCGACAT CGATCTCGGG
GGCATTTTCC ATTGTGCGCA GGCTTTCGGC AGGCGCATGG TCGCAGCCGG GCGTGGCTCG
ATGGTCAATA TTTCATCCAT CTGCGGCGAA GTGACCGTCT ATCCGCAGCC CCAGGTTTCC
TACAATGCCG CCAAGGCCGG CGTGAACCTG CTGACGAAAT CGCTTGCCGT AGAATGGGCG
AAGAGTGGTG TCCGCGTAAA CGCCGTCGCT CCCGGCTATG TCGGTACCGA ACTGACGTTG
CGCGGCCGCA GCAATCCCGA ATGGTTTGGC ACCTGGATGC AAATGACACC TATGGGACGT
CTGGGCGAGC CGCGCGAGAT CGCCAATGCC GTCCTTTTTC TTGCCGCCGA CGCTTCGAGC
TATATCACCG GTACGGTGTT GACGATCGAT GGCGGCTATA CCGCTCTTTA G
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| Protein sequence | MSDADFRLDG RRAVVTGAAR GIGRAIAERL AVAGAHVVVA DREEAEGNMA VASIEAAGGK
GAFISLDVTD PGAVARAVDT IYDEYGPVDV LVNNAGIVRN APALEMSLDD WKTVIDIDLG
GIFHCAQAFG RRMVAAGRGS MVNISSICGE VTVYPQPQVS YNAAKAGVNL LTKSLAVEWA
KSGVRVNAVA PGYVGTELTL RGRSNPEWFG TWMQMTPMGR LGEPREIANA VLFLAADASS
YITGTVLTID GGYTAL
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