Gene Smed_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3029 
Symbol 
ID5323907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3177903 
End bp3178283 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content61% 
IMG OID640791979 
Productendoribonuclease L-PSP 
Protein accessionYP_001328691 
Protein GI150398224 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.409696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCA AGCTCATCTC GTCCGGTTCT CCCTTCGAAA GGACGGCAGG CTATTCGCGT 
GCCGTCGTGA AAGGCGACTG GTGCTTCGTC TCCGGCACGA CCGGCTACGA CTACGCCACC
ATGACCATGC CGGAAACGGT GGAGGAACAG GCACGCAACT GCCTGAAGAC GATCGAAGAC
GCCCTGGAAC AAGCCGGTTT CTCGCTGTCG GACGTCGTGC GCAACCATTA CTACGTCACC
GATGCGAGCT TTGCCGACCG CGTCTTCCCA ATCTTCGGCG AGACCTTCGG CGACATCCGC
CCGGCCGCAA CGATGATCGT CTGCGACCTC ATCCGATCGG AAATGCTGAT CGAGATCGAG
GTCACGGCGT TTCGCGGCTA A
 
Protein sequence
MTRKLISSGS PFERTAGYSR AVVKGDWCFV SGTTGYDYAT MTMPETVEEQ ARNCLKTIED 
ALEQAGFSLS DVVRNHYYVT DASFADRVFP IFGETFGDIR PAATMIVCDL IRSEMLIEIE
VTAFRG