Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3029 |
Symbol | |
ID | 5323907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3177903 |
End bp | 3178283 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791979 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001328691 |
Protein GI | 150398224 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.409696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA AGCTCATCTC GTCCGGTTCT CCCTTCGAAA GGACGGCAGG CTATTCGCGT GCCGTCGTGA AAGGCGACTG GTGCTTCGTC TCCGGCACGA CCGGCTACGA CTACGCCACC ATGACCATGC CGGAAACGGT GGAGGAACAG GCACGCAACT GCCTGAAGAC GATCGAAGAC GCCCTGGAAC AAGCCGGTTT CTCGCTGTCG GACGTCGTGC GCAACCATTA CTACGTCACC GATGCGAGCT TTGCCGACCG CGTCTTCCCA ATCTTCGGCG AGACCTTCGG CGACATCCGC CCGGCCGCAA CGATGATCGT CTGCGACCTC ATCCGATCGG AAATGCTGAT CGAGATCGAG GTCACGGCGT TTCGCGGCTA A
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Protein sequence | MTRKLISSGS PFERTAGYSR AVVKGDWCFV SGTTGYDYAT MTMPETVEEQ ARNCLKTIED ALEQAGFSLS DVVRNHYYVT DASFADRVFP IFGETFGDIR PAATMIVCDL IRSEMLIEIE VTAFRG
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