Gene Smed_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3025 
Symbol 
ID5323903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3175633 
End bp3175839 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content58% 
IMG OID640791975 
Producthypothetical protein 
Protein accessionYP_001328687 
Protein GI150398220 
COG category[S] Function unknown 
COG ID[COG5515] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.347057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.478414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTCT ACCGCTTTCT AACCGGCCCC GACGATGCCT CCTTCTGTCA CAAGGTGACG 
GCGGCATTGA ACCAGGGGTG GACGCTGCAT GGCCCGACGA CCTACGCCTT CAATGCCGAC
ACCCAGCATA TGCAATGCGG CCAGGCGGTG GTGAAGGACG TGGAGGGCAA GGATTACCAT
CCGGATATGA AACTGTCGGA ACAGTAG
 
Protein sequence
MKLYRFLTGP DDASFCHKVT AALNQGWTLH GPTTYAFNAD TQHMQCGQAV VKDVEGKDYH 
PDMKLSEQ