Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3018 |
Symbol | |
ID | 5323896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3167408 |
End bp | 3167935 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791968 |
Product | dinucleoside polyphosphate hydrolase |
Protein accession | YP_001328680 |
Protein GI | 150398213 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACG AAAAGGGGCG CGTCATGAAG GCAGAGGACC TGCCCTACCG GCCATGCGTG GGCGCCATGG TTCTCAACCA GCAGGGACTG GTCTGGGTCG GGCATCGGCT CGCCGTCGGC AATTCGGAAT ATGACGGGTC GCCGCAGCTC TGGCAGATGC CGCAAGGGGG CATCGACGAG GGAGAGGACC CGCTCGAGGC CGCCTACCGC GAACTTTACG AAGAGACCGG CATCCGCTCG GTTTCGCTCA TCGCCGAGGC GCCGGACTGG ATCAATTACG ACCTTCCTTC GCACCTGATC GGGATCGGAC TCAAGGGCAA GTATCGCGGG CAGAGGCAGC GCTGGTACGC CTTCCGCTTC GAGGGCGACG AAAGCGAGAT CGCCATCAAC CCGCCGCCCG GCGGTCATGA GCCGGAATTC GACGCCTGGG AATGGAAGCC CATGCATGCG CTGCCAGGTT TGATCGTTCC CTTCAAACGC AAAGCCTATG AAGAGATCGT CGCGACGTTC TCGCATCTGG TGCGTTGA
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Protein sequence | MGNEKGRVMK AEDLPYRPCV GAMVLNQQGL VWVGHRLAVG NSEYDGSPQL WQMPQGGIDE GEDPLEAAYR ELYEETGIRS VSLIAEAPDW INYDLPSHLI GIGLKGKYRG QRQRWYAFRF EGDESEIAIN PPPGGHEPEF DAWEWKPMHA LPGLIVPFKR KAYEEIVATF SHLVR
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