Gene Smed_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3017 
Symbol 
ID5323895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3165866 
End bp3167065 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content66% 
IMG OID640791967 
Productprotein of unknown function DUF610 YibQ 
Protein accessionYP_001328679 
Protein GI150398212 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAACTG ATCTCAACGC CCCCCTTGGA CAGAACCGCA AGGAGAGACG CGCGCATAAG 
CGCGATCTTC GTCGCCTCCT GCGCTATTCG GGCCTCAGTC TTGCAGCCGT CGCCATCATG
GGGCTTTCGG CGTGGAGCGC CCTTTTTCCC GTTCCCCTGA CGCGCTCCCC GGCAGCACCG
ACCGTGGCCG AAGCGAACCC TGTTGCCGAG GCATCGTCCT CCGGCGCGCC CGTAACATCG
CCCTCGCCGC TGAAGCGCAG CGGCGCTCTC TCCGGCGCCG ATGTCGAGGA GGTTCTGACC
GACCACGGTG CGACGGTCCG GAAATACACG CCCCGTCCAC GCGAAACCGG CGGTCCCGCC
TTTATCGATG TCGGGTCGAC GCGCGGCCAG GACCCTCGCA TGGCAGCGCT TCCGAATGAA
AGCCTGCTGG AGGATCGTCC CGAAGGCAGG CTGCCGATCA TCGGCCCGGA CGGCCTGAGA
CCTATGGAGC AATATGCGCG TCCCTGGTCC GGCGCGCGCG GAACGCGGAT CGCCATCGTC
GTCGGCGGCC TCGGCCTCAG TCAGACGGGA ACTCAGCGCG CCATCCGCGA TCTGCCGCCG
GAAGTGACGC TCGCCTTCGC GGCGGCCGGT AACAGCCTCC AGCGCTGGAT GCAGGAGGCG
AGGCGCGACG GCCACGAAAT CCTGCTGCAG GTACCGATGG AACCATTCGA CGCCCCCGAC
AACGATCCGG GGCCACCTGC GCTCAGGGTT TCCGCGGATG CGCGGGAGAA TCTTGCGCAA
TTGCATAGGA GCATGGGGCA GATCACCAAC TATACCGGGG TCATGAACTA TCTCGGCGGG
CGGTTCCTTT CCAATGCGGA TGCGCTCGAG CCGGTCATGC GCGATCTCGG CAAGAGGGGT
CTTCTCTTCC TGGACGATGG CACGTCGGCA CAATCCCTGT CCGGCACACT CGCCGGCGCC
TTCGACGTGC CGCACGGCTT CGCCGATGTC GTTCTCGACA GCGAACTCAG CCGCAGTACC
ATTCTGCGCA GGCTTGACGA TTTGGAGCGC ATCGCGCGCA AGGGCGGTAC GGCAATCGGC
GTGGCCTCCG CCTTCGACGA AAGCGTCACG TCCATTGCGG AATGGATCGA GGAAGCCGGC
GGACGGGGCA TCGAGGTTGT CGGCGTTGCC GCGCTCGTCA AAGATCCGAA ACACAATTGA
 
Protein sequence
MATDLNAPLG QNRKERRAHK RDLRRLLRYS GLSLAAVAIM GLSAWSALFP VPLTRSPAAP 
TVAEANPVAE ASSSGAPVTS PSPLKRSGAL SGADVEEVLT DHGATVRKYT PRPRETGGPA
FIDVGSTRGQ DPRMAALPNE SLLEDRPEGR LPIIGPDGLR PMEQYARPWS GARGTRIAIV
VGGLGLSQTG TQRAIRDLPP EVTLAFAAAG NSLQRWMQEA RRDGHEILLQ VPMEPFDAPD
NDPGPPALRV SADARENLAQ LHRSMGQITN YTGVMNYLGG RFLSNADALE PVMRDLGKRG
LLFLDDGTSA QSLSGTLAGA FDVPHGFADV VLDSELSRST ILRRLDDLER IARKGGTAIG
VASAFDESVT SIAEWIEEAG GRGIEVVGVA ALVKDPKHN