Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3017 |
Symbol | |
ID | 5323895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3165866 |
End bp | 3167065 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640791967 |
Product | protein of unknown function DUF610 YibQ |
Protein accession | YP_001328679 |
Protein GI | 150398212 |
COG category | [S] Function unknown |
COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAACTG ATCTCAACGC CCCCCTTGGA CAGAACCGCA AGGAGAGACG CGCGCATAAG CGCGATCTTC GTCGCCTCCT GCGCTATTCG GGCCTCAGTC TTGCAGCCGT CGCCATCATG GGGCTTTCGG CGTGGAGCGC CCTTTTTCCC GTTCCCCTGA CGCGCTCCCC GGCAGCACCG ACCGTGGCCG AAGCGAACCC TGTTGCCGAG GCATCGTCCT CCGGCGCGCC CGTAACATCG CCCTCGCCGC TGAAGCGCAG CGGCGCTCTC TCCGGCGCCG ATGTCGAGGA GGTTCTGACC GACCACGGTG CGACGGTCCG GAAATACACG CCCCGTCCAC GCGAAACCGG CGGTCCCGCC TTTATCGATG TCGGGTCGAC GCGCGGCCAG GACCCTCGCA TGGCAGCGCT TCCGAATGAA AGCCTGCTGG AGGATCGTCC CGAAGGCAGG CTGCCGATCA TCGGCCCGGA CGGCCTGAGA CCTATGGAGC AATATGCGCG TCCCTGGTCC GGCGCGCGCG GAACGCGGAT CGCCATCGTC GTCGGCGGCC TCGGCCTCAG TCAGACGGGA ACTCAGCGCG CCATCCGCGA TCTGCCGCCG GAAGTGACGC TCGCCTTCGC GGCGGCCGGT AACAGCCTCC AGCGCTGGAT GCAGGAGGCG AGGCGCGACG GCCACGAAAT CCTGCTGCAG GTACCGATGG AACCATTCGA CGCCCCCGAC AACGATCCGG GGCCACCTGC GCTCAGGGTT TCCGCGGATG CGCGGGAGAA TCTTGCGCAA TTGCATAGGA GCATGGGGCA GATCACCAAC TATACCGGGG TCATGAACTA TCTCGGCGGG CGGTTCCTTT CCAATGCGGA TGCGCTCGAG CCGGTCATGC GCGATCTCGG CAAGAGGGGT CTTCTCTTCC TGGACGATGG CACGTCGGCA CAATCCCTGT CCGGCACACT CGCCGGCGCC TTCGACGTGC CGCACGGCTT CGCCGATGTC GTTCTCGACA GCGAACTCAG CCGCAGTACC ATTCTGCGCA GGCTTGACGA TTTGGAGCGC ATCGCGCGCA AGGGCGGTAC GGCAATCGGC GTGGCCTCCG CCTTCGACGA AAGCGTCACG TCCATTGCGG AATGGATCGA GGAAGCCGGC GGACGGGGCA TCGAGGTTGT CGGCGTTGCC GCGCTCGTCA AAGATCCGAA ACACAATTGA
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Protein sequence | MATDLNAPLG QNRKERRAHK RDLRRLLRYS GLSLAAVAIM GLSAWSALFP VPLTRSPAAP TVAEANPVAE ASSSGAPVTS PSPLKRSGAL SGADVEEVLT DHGATVRKYT PRPRETGGPA FIDVGSTRGQ DPRMAALPNE SLLEDRPEGR LPIIGPDGLR PMEQYARPWS GARGTRIAIV VGGLGLSQTG TQRAIRDLPP EVTLAFAAAG NSLQRWMQEA RRDGHEILLQ VPMEPFDAPD NDPGPPALRV SADARENLAQ LHRSMGQITN YTGVMNYLGG RFLSNADALE PVMRDLGKRG LLFLDDGTSA QSLSGTLAGA FDVPHGFADV VLDSELSRST ILRRLDDLER IARKGGTAIG VASAFDESVT SIAEWIEEAG GRGIEVVGVA ALVKDPKHN
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