Gene Smed_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3010 
Symbol 
ID5323888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3158406 
End bp3159587 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID640791960 
Productgamma-glutamyl kinase 
Protein accessionYP_001328672 
Protein GI150398205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG CCCGCAAAGC GCTCGATAAA TACCGCCGGG TCGTGATCAA GATAGGCTCG 
GCGCTGCTCG TCGACCGCAA GACGGGTTTG AAGAAGAGCT GGCTCGACGC CATGTGCGCC
GATATCGCGG CCCTCAGGGC CAAGGGCGTG GAGGTGCTCG TCGTCTCCTC CGGGGCGATC
GCGCTCGGAC GCACGGTGCT CGACCTTTCC GCGGGTGCCT TGAAGCTCGA AGAGAGCCAG
GCGGCCGCCG CCGTCGGCCA GATCGTGCTG GCGCGTGCCT GGTCGGAGAG CCTCTCCACC
CATGCGATCG TCGCCGGCCA GATCCTTCTG ACGCTCGGCG ACACCGAGGA GCGCCGGCGC
TACCTCAATG CCCGCGCGAC GATCGGCCAG CTTCTGAGGC TTGGCTCCGT GCCGATCATC
AACGAGAATG ACACGGTCGC CACGACCGAA ATCCGCTATG GCGACAACGA TCGGCTCGCA
GCGCGGGTCG CGACCATGGT CGGCGCCGAT CTTCTGGTCC TGCTTTCGGA TATAGACGGG
CTCTATACGG CACCGCCGCA TCTCGATCCG AATGCCCGCC TTCTTGAAAC CGTCGCCGAA
ATCACGCCCG ACATAGAGGC AATGGCAGGC GGCGCAGCCT CGGAACTCTC GCGCGGCGGA
ATGCGCACCA AGATCGACGC CGGCAAGATC GCCACCACGG CCGGCTGCGC GATGATCATC
GCCTCCGGCA AGCCAGAGCA TCCGCTGGCA GCGGTGGAAG CAGGTGGGCG CTCCTCCTGG
TTCGCCCCCG CCGGCTCTCC AGTAACGGCC CGAAAAACCT GGATCGCAGG GCAGCTTCTG
CCGGCCGGTT CGCTCTCGAT CGACGCCGGG GCGGAAACGG CGCTCAGATC CGGCAAGAGC
CTGCTGCCGG CCGGTGTCCG GCAGGTGACG GGAAGCTTCG GCCGCGGCGA TACCATTGCC
ATAATCGGCG CCTCAGGGCG CGAGATCGCC CGCGGGCTCG CCGGCTACGA CGCCGAGGAG
GCGCGCCAGA TCGCCGGCAA AAAATCGGCT GAGATCGCCG TCATTCTCGG CTATGCCGGC
CGCGCGGCCA TGGTGCACCG CGACGATCTG GTCATGACGG CTCCATCGGG TGGGCGCCTG
GCGGAGGAAA GCGACGAGGG AAAGGGCAAG CTCCATGCTT GA
 
Protein sequence
MTKARKALDK YRRVVIKIGS ALLVDRKTGL KKSWLDAMCA DIAALRAKGV EVLVVSSGAI 
ALGRTVLDLS AGALKLEESQ AAAAVGQIVL ARAWSESLST HAIVAGQILL TLGDTEERRR
YLNARATIGQ LLRLGSVPII NENDTVATTE IRYGDNDRLA ARVATMVGAD LLVLLSDIDG
LYTAPPHLDP NARLLETVAE ITPDIEAMAG GAASELSRGG MRTKIDAGKI ATTAGCAMII
ASGKPEHPLA AVEAGGRSSW FAPAGSPVTA RKTWIAGQLL PAGSLSIDAG AETALRSGKS
LLPAGVRQVT GSFGRGDTIA IIGASGREIA RGLAGYDAEE ARQIAGKKSA EIAVILGYAG
RAAMVHRDDL VMTAPSGGRL AEESDEGKGK LHA