Gene Smed_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2996 
Symbol 
ID5323873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3147005 
End bp3148039 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID640791947 
Productalcohol dehydrogenase 
Protein accessionYP_001328660 
Protein GI150398193 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGG CACAGACGAT GAAGGCGGCT GTCGTACGCC AGTTCCGCGC TCCGCTGACC 
ATAGAGGAGA TGGAAGTCCC AACGCCTGGC GCCGGGCAGG TCCTCGTAAA ATATGAAGCA
ACGGGCGTGT GCCATACCGA TCTGCATGCG GCAAACGGCG ATTGGCCCGT TAAGCCGGCT
CCGCCCTTTA TTCCAGGGCA CGAGGGTGTT GGCTTCGTCT CGGCCGTGGG CGCCGGCGTG
AGGAGAGTGA AAGAAGGTGA CAGGGTTGGG GTGCCATGGC TCCACACCGC TTGCCGTTAC
TGTACCTATT GCCGGACCGG TTGGGAAACG CTGTGCTCTT CGCAATCGAA CACCGGGTAC
TCGGTGAACG GCACCTTCGC GGAGTTCGGA CTGGCAGATC CCGAGTTCGC GGGAAAGATT
CCTGATCGGT TGGAATTCGG AGCCGCCGCG CCCGTTCTCT GCGCGGGAGT GACCGTCTAC
AAGGGGCTGA AGGAAACGGA AGTCCGTCCC GGTGAATGGG TGGCCATCTC GGGCGTCGGC
GGTCTCGGCC ACATGGCGGT GCAATATGCC AAGGCAATGG GAATGCACGT GGTGGCCGCC
GACATATCCG AAGACAAGCT GGCGCTGGCC AAGCAACTTG GCGCCGACAT CGCAGTAAAC
GGCAAGTCGG ACGATGCAGT CGAGCAGGTA CAGAAGGCCA CGAGCGGCGG CGTTCACGGA
GTGCTCGTGA CCGCTGTCTC TCCCGCCGCC ATGGAACAGG CCTTTGGTTT CCTGCGGTCG
AAAGGCACGA TGGTCTTGGT CGGTCTTCCC CCCGGAATGA TGTCCTTGCC GGTTTTCGAG
ACCGTCCTGA AACGCATAAC CGTGCGTGGA TCAATCGTGG GTACCCGACA AGACCTCGAG
GAATCGCTCG CTTTCGCGGC GGAAGGCAAG GTAAAGCCGT ATTTCTCGTG GGAGAGCCTC
GAGAACATCA ACGACATCTT CCATCGCATG GAAGCGGGCA AGATCGACGG TCGAATAGTG
GTGCGATTAC AGTAG
 
Protein sequence
MKMAQTMKAA VVRQFRAPLT IEEMEVPTPG AGQVLVKYEA TGVCHTDLHA ANGDWPVKPA 
PPFIPGHEGV GFVSAVGAGV RRVKEGDRVG VPWLHTACRY CTYCRTGWET LCSSQSNTGY
SVNGTFAEFG LADPEFAGKI PDRLEFGAAA PVLCAGVTVY KGLKETEVRP GEWVAISGVG
GLGHMAVQYA KAMGMHVVAA DISEDKLALA KQLGADIAVN GKSDDAVEQV QKATSGGVHG
VLVTAVSPAA MEQAFGFLRS KGTMVLVGLP PGMMSLPVFE TVLKRITVRG SIVGTRQDLE
ESLAFAAEGK VKPYFSWESL ENINDIFHRM EAGKIDGRIV VRLQ