| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2983 |
|---|
| Symbol | |
|---|
| ID | 5323860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3130780 |
|---|
| End bp | 3132213 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791934 |
|---|
| Product | dihydropyrimidinase |
|---|
| Protein accession | YP_001328647 |
|---|
| Protein GI | 150398180 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type
[TIGR02033] D-hydantoinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCG ATAAGGTCAT CCGTTATGGA ACGGTCGTCA CCGCCAGCGA TACATTCAAG
AGCGATGTCG GCATTAAGGA AGGCCGCATC GCGGCGCTTG CGGGGGCGTT GACGGAGGCG
GACGAGATCA TCGACGCAAC CGGCCTCTAC GTCATGCCCG GCGGCATAGA CAGCCATGTT
CATCTGGACC AGCCCTCCGG TGAGGGCATC GTCATGGCCG ACGACTTCGA AAGCGGTACC
CGTTCGGCGG CGATCGGCGG AAACAGCACG GTTCTGACCT TCTGCATGCA GGAGAAGGGC
CAGAGCCTTC GCGAGGCACT GAGACTTTAC CACGCCAAAG CGGAGGGACG CTGCCACATC
GACGTATCCT TCCACCTGGT CGTCACCGAT CCTACGCCCG AGGTGCTCGG GCAGGAACTG
CCGGCGCTCG TCGCCGACGG CTACACCTCG ATCAAGGTCT TCATGACCTA TGACGGTCTG
CGGCTGCGCG ACGACGAAAT CCTCGCCACG CTCGACGCGG CGCGCCGAAC CGGCGCATTG
GTCATGGTTC ACTGCGAGAA CGAGGACGCG ATCCGCTATC TGATCGGGCG CCACGAGGCC
GAAGGACAGG TCGAACCCAG ATACCATGCA GCCACTCGGC CGATTGCCGC CGAGCGCGAG
GCAACGCACC GGGCTTTGTC GCTCGCCGAG ATTGTCGACA CGCCTGTGGT CATCGTTCAT
GTTTCCAATC GTCAGGCGAT GGAAGAGATC AGGCGGGCGC GGCAACGCGG CCAGAAGATC
GCCGGCGAAA CATGCCCGCA ATATCTGATG CTGACTTCCG AGGATCTGGA TGCCGACGCC
CTTGAAGGAG CGAAATATGT CTGCTCGCCG CCGCCTCGGG ACAAGGAAAG CCAATCGGCA
TGCTGGGAGG GCATTGAGCA AGGCGTGTTC GATCTCTTTT CTTCGGATCA CTGCCCGTTT
CGCTTCGACG ATCCCGCAGG CAAGCTGAAC GAGAAAGGCA GACGGCACTT CCGCTGGATA
CCCAACGGCA TCCCGGGTGT CGCTACGCGG CTGCCTATCC TCTTCTCGGA AGGCGTGATG
AAGGGACGGA TCGATCTGAA TCGCTTCGTC GCGGTAACAT CGACCAACCA CGCAAAGCTC
TACGGACTCT ATCCGCGCAA GGGCACGATC GCGATCGGAG CCGATGCCGA CATCGCACTC
TGGGATCCGG ATATGCAAAT CACGCTGACG AACGAGATGC TTCGGCATGG GGCCGATTAT
ACGCCCTATG AGGGCCTCGC CGTTCGCGGC TGGCCGGTTC GGGTCATGGT CCGAGGCACC
ACGGTCGCCA AAGACGGGCA TCTGTGTGAT AGCCGACGCG GCGGATCCTA TCTGCACAGG
ACGCTCTCCT CGTTGACGAG GAATGCAGGC AACGGGAACC GTAACCGCGG TTAG
|
|---|
| Protein sequence | MRFDKVIRYG TVVTASDTFK SDVGIKEGRI AALAGALTEA DEIIDATGLY VMPGGIDSHV
HLDQPSGEGI VMADDFESGT RSAAIGGNST VLTFCMQEKG QSLREALRLY HAKAEGRCHI
DVSFHLVVTD PTPEVLGQEL PALVADGYTS IKVFMTYDGL RLRDDEILAT LDAARRTGAL
VMVHCENEDA IRYLIGRHEA EGQVEPRYHA ATRPIAAERE ATHRALSLAE IVDTPVVIVH
VSNRQAMEEI RRARQRGQKI AGETCPQYLM LTSEDLDADA LEGAKYVCSP PPRDKESQSA
CWEGIEQGVF DLFSSDHCPF RFDDPAGKLN EKGRRHFRWI PNGIPGVATR LPILFSEGVM
KGRIDLNRFV AVTSTNHAKL YGLYPRKGTI AIGADADIAL WDPDMQITLT NEMLRHGADY
TPYEGLAVRG WPVRVMVRGT TVAKDGHLCD SRRGGSYLHR TLSSLTRNAG NGNRNRG
|
|---|
| |