Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2979 |
Symbol | |
ID | 5323856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3127146 |
End bp | 3127943 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791930 |
Product | extracellular solute-binding protein |
Protein accession | YP_001328643 |
Protein GI | 150398176 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCA CATCCAAGCT CAAAGCCGCC ATCGTTTCCA CAGCCTTCGC TGCAACCGGA GCCTTCGCTG CCCAGGCTGC CGACCTGACG GTCGGCGCCA ATATCGGCAA CGTTCCTTGG GAATTCCAGG AGGCGGACGG CAAGATCGTC GGCTTCGAGG TCGACCTGGT CAACGAGATC GCGAAGCGGC TCGGCAAATC CGTGGAGTTC GTCAATACGC CATTCAACGG CCTTTTCCCG GCCGTGCAGT CCGGACGCAT CGACATGGCG ATTTCGTCGA TCACCATCAC CGACAAGCGG CTGGAATCCG TCTCATTCGC GCAGCCCTAT TACGACAGCG ACCAGTCACT CACCGTGACC GCGACTTCCG GCACCACCGG CTTGAAGGAC ATGGAGGGGA AGGTCGTTGG CGTCGACACC GGCTCGACGG GCGACATGTG GGCCGACAGG AACAAGGCGG ACTACAAGTT CGGGGAGATT CGCCGCTTCG AGGGTCTGTC TCCGGCCATG CTCGATCTCG TCGCCGGCCG TGTCGACGGC TATATCAGCG ACATTCCGGC CCTGCTCTAC TATGTGAAGG ACAAGCCAGA CCTGAAAGTC GTCGAGCGCA TCCCGACCGG CGAGAAATAC TCGATCATGT TCAACAAGGG CGCTCCGCTT GCAGCCGAAG TGAACGACGT CATCACGACG CTGAAAGGCG AAGGATTTAT CGCAAAACTG CACGAGAGCT GGTTCGGTGC CAAGGCTGAG GATACGACCT CGACCGTCGC TGTACTGGAC ATGCCCGCGG CCGAGTAA
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Protein sequence | MTRTSKLKAA IVSTAFAATG AFAAQAADLT VGANIGNVPW EFQEADGKIV GFEVDLVNEI AKRLGKSVEF VNTPFNGLFP AVQSGRIDMA ISSITITDKR LESVSFAQPY YDSDQSLTVT ATSGTTGLKD MEGKVVGVDT GSTGDMWADR NKADYKFGEI RRFEGLSPAM LDLVAGRVDG YISDIPALLY YVKDKPDLKV VERIPTGEKY SIMFNKGAPL AAEVNDVITT LKGEGFIAKL HESWFGAKAE DTTSTVAVLD MPAAE
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