| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2976 |
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| Symbol | |
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| ID | 5323853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3122613 |
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| End bp | 3124439 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791927 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001328640 |
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| Protein GI | 150398173 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.393631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC GCAACATCGC GATCATCGCG CACGTCGACC ATGGGAAAAC CACGCTCGTC
GACGAACTCC TGAAGCAGTC GGGCTCCTTC CGCGACAACC AGCGCGTCGC CGAGCGCATG
ATGGATTCCA ACGAGCTGGA AAAGGAACGC GGCATCACCA TCCTTGCCAA GGCGACATCG
GTGGAATGGA AGGGTACGCG CATCAATATC GTCGACACCC CCGGCCACGC CGACTTCGGC
GGCGAGGTCG AGCGCATCCT ATCGATGGTG GACGGTGCCA TCGTTCTGGT CGACGCCGCC
GAGGGCCCCA TGCCGCAGAC GAAGTTCGTC GTCGGCAAGG CACTCAAGGT CGGTCTTCGC
CCGATCGTGG CAATCAACAA GATCGATAGG CCCGATGCGC GCCACGAGGA AGTCATCAAC
GAGGTATTCG ACCTTTTCGC GGCGCTTGAT GCGACCGATG AGCAGCTCGA CTTCCCGATC
CTCTACGGCT CCGGCCGCAA CGGCTGGATG AACGTCGCGC CGGAAGGTCC GCAGGATCAA
GGCCTGGCAC CGCTTCTCGA TCTCGTTCTC GACCATGTTC CGGAGCCGAG CGTCGGCGAG
GGCCCTTTCC GGATGATCGG CACGATTCTC GAAGCCAATC CCTTCCTCGG CCGCATCATC
ACCGGGCGTA TTCATTCCGG TTCGATCAAG CCGAACCAGC CGGTCAAGGT TCTTGGGCAG
GACGGCAAGC TGCTCGAATC CGGACGCATT TCCAAGATCC TCGCTTTCCG TGGCATCGAG
CGCCAGCCGA TCGAGGAAGC CCATGCGGGC GACATCGTGG CCATTGCCGG CCTTTCCAAG
GGCACCGTCG CCGATACCTT CTGTGACCCG GCGATCAGCG AGCCGCTGAA AGCGCAGCCG
ATCGATCCGC CGACCGTCAC CATGTCCTTC CTCGTCAACG ATTCTCCGCT CGCCGGCACC
GAAGGCGACA AGGTCACTTC GCGCGTCATC CGCGACCGCC TCTTCAAGGA AGCGGAAGGC
AATGTCGCGC TGAAAATCGA GGAATCGTCC GAGAAGGACT CGTTCTACGT TTCCGGCCGC
GGCGAACTGC AGCTTGCCGT GCTTATCGAA ACCATGCGCC GCGAAGGCTT CGAACTCGCC
GTTTCGCGTC CGCGCGTGGT CATGCACAAG GACGAGAACG GCCAGCTTCT GGAGCCGATC
GAAGAGGTCG TCATCGACGT CGACGAAGAG CATTCGGGCG TGGTCGTTCA GAAAATGTCG
GAGCGCAAGG CCGAAATGGC CGAGCTGCGT CCGTCCGGCG GAAACCGCGT CCGGCTCGTC
TTCTTCGCGC CGACCCGCGG TCTCATCGGC TATCAGTCGG AGCTTCTGAC CGACACGCGC
GGCACGGCGA TCATGAACCG CCTGTTCCAC GACTATCAGC CCTTTAAGGG TGAGATCGGC
GGCCGGGTGA ACGGTGTTCT GCTCTCGAAC GATGCAGGTG AATCCGTGGC CTATGCGATG
TTCAATCTGG AAGATCGCGG CCCGATGATC ATCGACGCCG GCGAAAAGGT CTATGCCGGT
ATGATCATCG GCATCCACAC GCGCGACAAC GATCTGGAAG TGAACGTGCT GAAGGGCAAG
AAGCTCACCA ACATGCGCGC CTCCGGCAAG GATGAAGCGG TAAAGCTGAC GCCTCCGATC
CGCATGACGC TCGACCGGGC GCTGTCATGG ATCCAGGACG ACGAACTGGT CGAAGTGACG
CCGAAATCGA TCCGGCTTCG CAAGATGTAC CTCGATCCCA ACGAGCGCAA GCGCTTCGAG
AAGACCCGCA CCGCGGGCGC CGCCTGA
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| Protein sequence | MSIRNIAIIA HVDHGKTTLV DELLKQSGSF RDNQRVAERM MDSNELEKER GITILAKATS
VEWKGTRINI VDTPGHADFG GEVERILSMV DGAIVLVDAA EGPMPQTKFV VGKALKVGLR
PIVAINKIDR PDARHEEVIN EVFDLFAALD ATDEQLDFPI LYGSGRNGWM NVAPEGPQDQ
GLAPLLDLVL DHVPEPSVGE GPFRMIGTIL EANPFLGRII TGRIHSGSIK PNQPVKVLGQ
DGKLLESGRI SKILAFRGIE RQPIEEAHAG DIVAIAGLSK GTVADTFCDP AISEPLKAQP
IDPPTVTMSF LVNDSPLAGT EGDKVTSRVI RDRLFKEAEG NVALKIEESS EKDSFYVSGR
GELQLAVLIE TMRREGFELA VSRPRVVMHK DENGQLLEPI EEVVIDVDEE HSGVVVQKMS
ERKAEMAELR PSGGNRVRLV FFAPTRGLIG YQSELLTDTR GTAIMNRLFH DYQPFKGEIG
GRVNGVLLSN DAGESVAYAM FNLEDRGPMI IDAGEKVYAG MIIGIHTRDN DLEVNVLKGK
KLTNMRASGK DEAVKLTPPI RMTLDRALSW IQDDELVEVT PKSIRLRKMY LDPNERKRFE
KTRTAGAA
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