| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2965 |
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| Symbol | |
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| ID | 5323842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3111205 |
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| End bp | 3112287 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640791916 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001328629 |
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| Protein GI | 150398162 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCATCC TCGGTATTGA GACTAGCTGC GACGAAACCG CGGCATCGGT CGTCATGCGC
GACGAGGAGG GCCGCGGAAG GATTCTCGGC GACGTGGTGC TGAGCCAGCT GGAAGAGCAT
AGCGCCTATG GCGGCGTCGT TCCCGAAATC GCCGCGCGCG CGCATGTCGA GGCGCTCGAT
ACGCTGATCG TAGAGGCGCT GTTGCGCGCC GGCGTCAAGC TTGAGGACAT CGACGCGATC
GCCGCTACGA GCGGCCCGGG CCTGATCGGC GGGCTCATCG TCGGGCTGAT GACCGGAAAA
GCGATCGCAC GGGCGACCGG CAAGCCGCTC TATGCGGTCA ACCATCTCGA AGGTCACGCG
CTGACTGCGC GGTTGACCGA CGAGCTCCAG TTTCCCTATC TGATGCTGCT CGTCTCCGGC
GGGCACACGC AGCTGATCCT CGTCAAAGGT GTCGGTGAAT ATGAGCGCTG GGGCACGACG
ATCGACGACG CGCTGGGCGA GGCTTTCGAC AAGACCGCCA AGCTGCTCGG CCTTCCTTAT
CCGGGCGGCC CGGCCGTGGA ACGGGCAGCC CGGACCGGCA ATCCGGAGCG TTTCGACTTT
CCGCGGCCGC TCGTTGGCGA TGCCAGGCTC GATTTCTCCT TCTCCGGCCT GAAGACGGCC
GTCCGGCAGG CGGCGAAATC GCTGGAGCCG GTGACCGAGG CTGACATCGC GGACATCTGC
GCTTCCTTCC AGCGCGCCAT TTCCCGCACC CTCAGGGATC GGGTCGGGCG CAGCTTGAAG
CGGTTCAAGG CGGAGTCCGC ATCCGTGGCG CAACCGGCCC TCGTCGTTGC CGGCGGGGTT
GCCGCGAACC AGGCATTGCG CCAGACCCTT CAATCGCTCT GTGACGAGCA CGGCTTTCGT
TTTGTGGCGC CGCCGCTCTC GCTTTGCACC GACAATGCCG CGATGATCGC CTGGGCCGGT
GCGGAGCGGC TGGCCGCCGG CCTGCCGGCC GACGGACTGG ATGTGGCCCC GCGTTCGCGC
TGGCCGCTCG ACGCCGAAGC AAAGGCCTTG ATCGGCTCAG GCAGACGCGG CGCCAAGGCA
TGA
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| Protein sequence | MRILGIETSC DETAASVVMR DEEGRGRILG DVVLSQLEEH SAYGGVVPEI AARAHVEALD
TLIVEALLRA GVKLEDIDAI AATSGPGLIG GLIVGLMTGK AIARATGKPL YAVNHLEGHA
LTARLTDELQ FPYLMLLVSG GHTQLILVKG VGEYERWGTT IDDALGEAFD KTAKLLGLPY
PGGPAVERAA RTGNPERFDF PRPLVGDARL DFSFSGLKTA VRQAAKSLEP VTEADIADIC
ASFQRAISRT LRDRVGRSLK RFKAESASVA QPALVVAGGV AANQALRQTL QSLCDEHGFR
FVAPPLSLCT DNAAMIAWAG AERLAAGLPA DGLDVAPRSR WPLDAEAKAL IGSGRRGAKA
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