Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2961 |
Symbol | |
ID | 5323838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3108787 |
End bp | 3109443 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791912 |
Product | hypothetical protein |
Protein accession | YP_001328625 |
Protein GI | 150398158 |
COG category | [R] General function prediction only |
COG ID | [COG3897] Predicted methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.210334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGACCG ATCCGGAAAG TTTCGTCCGC GCCAACACCG GCATTCTTAT GCCGCCGCAC GTACCGGAAA TCCGCCTGCA TCTTGCGAGC GAGGCGCATG AGCTTTGGCT GAAGACCGAG GAAGAGCTGG AACAGATCGG TCTGCCGCCG CCCTTTTGGG CCTTTGCCTG GGCGGGCGGG CAGGGGCTCG CACGTTTCAT CCTTGATCAT CCCGAAACGG TGCGCGGCCG CCGCGTCGTC GATTTCGCTT CCGGTTCCGG CCTCGTCGCC ATCGCGGCGA AGATGGCCGG CGCCGACGAA GTCGTGGCCG CCGACATCGA TCCTTGGTGC GAAACAGCCG CGCGGCTGAA TGCGGAACTC AACGGTGTGT CGCTCGCCTT TGCCGCCGCC GATATCGTTG GATCGGAACG GGCAGCCGAT GTTTACCTCG CCGGAGACGT CTTCTACGAC AAGAGCTTCG CCGCCCTGCT TTTGCCCTGG TTCGATGCAC TCGAACGTGC CGGTGCTGTC GTCCTGGTCG GCGATCCTGG TCGGGCCTAT TGTCCGCGCG AGCGGATGAC GCCGCTTGCG ACCTACGAGG TCCCGGTGAC GCGGGCGCTC GAAGACTGCG AGGTGAAGCG CACGACGGTC TGGCGATTCG GTCAGGCGGC CTCGTGA
|
Protein sequence | MRTDPESFVR ANTGILMPPH VPEIRLHLAS EAHELWLKTE EELEQIGLPP PFWAFAWAGG QGLARFILDH PETVRGRRVV DFASGSGLVA IAAKMAGADE VVAADIDPWC ETAARLNAEL NGVSLAFAAA DIVGSERAAD VYLAGDVFYD KSFAALLLPW FDALERAGAV VLVGDPGRAY CPRERMTPLA TYEVPVTRAL EDCEVKRTTV WRFGQAAS
|
| |