Gene Smed_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2961 
Symbol 
ID5323838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3108787 
End bp3109443 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID640791912 
Producthypothetical protein 
Protein accessionYP_001328625 
Protein GI150398158 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.210334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGACCG ATCCGGAAAG TTTCGTCCGC GCCAACACCG GCATTCTTAT GCCGCCGCAC 
GTACCGGAAA TCCGCCTGCA TCTTGCGAGC GAGGCGCATG AGCTTTGGCT GAAGACCGAG
GAAGAGCTGG AACAGATCGG TCTGCCGCCG CCCTTTTGGG CCTTTGCCTG GGCGGGCGGG
CAGGGGCTCG CACGTTTCAT CCTTGATCAT CCCGAAACGG TGCGCGGCCG CCGCGTCGTC
GATTTCGCTT CCGGTTCCGG CCTCGTCGCC ATCGCGGCGA AGATGGCCGG CGCCGACGAA
GTCGTGGCCG CCGACATCGA TCCTTGGTGC GAAACAGCCG CGCGGCTGAA TGCGGAACTC
AACGGTGTGT CGCTCGCCTT TGCCGCCGCC GATATCGTTG GATCGGAACG GGCAGCCGAT
GTTTACCTCG CCGGAGACGT CTTCTACGAC AAGAGCTTCG CCGCCCTGCT TTTGCCCTGG
TTCGATGCAC TCGAACGTGC CGGTGCTGTC GTCCTGGTCG GCGATCCTGG TCGGGCCTAT
TGTCCGCGCG AGCGGATGAC GCCGCTTGCG ACCTACGAGG TCCCGGTGAC GCGGGCGCTC
GAAGACTGCG AGGTGAAGCG CACGACGGTC TGGCGATTCG GTCAGGCGGC CTCGTGA
 
Protein sequence
MRTDPESFVR ANTGILMPPH VPEIRLHLAS EAHELWLKTE EELEQIGLPP PFWAFAWAGG 
QGLARFILDH PETVRGRRVV DFASGSGLVA IAAKMAGADE VVAADIDPWC ETAARLNAEL
NGVSLAFAAA DIVGSERAAD VYLAGDVFYD KSFAALLLPW FDALERAGAV VLVGDPGRAY
CPRERMTPLA TYEVPVTRAL EDCEVKRTTV WRFGQAAS