| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2957 |
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| Symbol | sdhA |
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| ID | 5323834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3105203 |
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| End bp | 3107044 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791908 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001328621 |
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| Protein GI | 150398154 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA TCAGCACGCC CGCTGCAAAC GGCAAGGCAT ACAAGTATGT CGACCACTCC
TTCGACGTTG TCGTCGTGGG CGCCGGCGGG GCGGGCCTGC GCGCGACGCT CGGCATGGCC
GAGCAGGGCC TGAGGACGGC CTGCATCACC AAGGTCTTCC CGACGCGCTC GCATACGGTC
GCGGCACAAG GCGGCATCGC CGCTTCGCTG CAGAACATGA CGCCCGACTG CTGGCAATGG
CACCTTTACG ACACCGTCAA GGGCTCGGAC TGGCTCGGCG ACGTCGACGC CATGCAGTAT
CTCGCCATGG AGGCGCCGAA GGCGGTCTAC GAGCTCGAGC ACTATGGCGT TCCCTTCTCG
CGCAACGAGG AAGGCAAGAT CTACCAGCGC CCCTTTGGCG GCCACATGCA GAATTACGGC
GAAGGACCGC CGGTACAGCG CACCTGTGCG GCCGCCGACC GCACCGGCCA CGCGATCCTG
CATACGCTTT ACGGCCAGTC GCTCAGGAAC AATGCCGAAT TCTTCATCGA GTATTTCGCC
ATCGACCTGA TCATGTCGGA TGACGGACGA TGCACCGGCG TCGTCGCCTG GAATCTCGAC
GATGGCACGA TCCACCGGTT CGCGGCAAAG ATGGTGGTAC TGGCGACCGG CGGCTACGGC
CGCGCCTATT TTTCGGCGAC TTCGGCGCAT ACGTGTACGG GCGACGGTGG GGGCATGATC
GCGCGTGCCG GCCTGCCGCT GCAGGACATG GAATTCGTGC AATTCCATCC GACCGGCATC
TACGGTGCGG GTTGCCTCAT CACCGAAGGC GCACGCGGCG AGGGCGGGTA TCTCGTCAAT
TCCGAGGGCG AGCGTTTTAT GGAGCGCTAT GCGCCCTCGG CCAAGGACCT TGCCTCGCGC
GACGTCGTTT CCCGCTGCAT GACGATGGAA ATCCGCGAGG GACGAGGCGT CGGGAAGAAC
AAGGACCACA TCTTCCTGCA CCTCGACCAT CTCGATCCGG CGGTACTGCA TGAGCGTCTG
CCCGGAATTT CGGAGTCGGC GAAGATCTTT GCGGGCGTCG ACGTCACGCG CGAACCGATT
CCGGTGCTGC CGACTGTTCA TTACAACATG GGCGGCGTGC CGACCAATTA CTGGGGCGAA
GTGCTGAACG CGGACAGCCA GAACCCCGAG CGCATCGCGC CCGGGCTGAT GGCCGTCGGC
GAAGCCGGCT GCGCTTCGGT GCACGGCGCC AATCGGCTCG GCTCGAACTC GCTGATCGAC
CTTGTCGTCT TCGGCCGTGC GGCGGCTATC CGCGCCGGCC AGATCATCGA CCGCAACGCG
GCGGTACCGG AGGTCGATAT TGCTGCATGC GACCGCATCA TGGACCGTTT CGACCGGCTG
CGGCACGCGA ATGGCGCAAC GCCGACGGCC GTTCTGCGCG ACAAGATGCA GCGCGCCATG
CAGGAAGATG CGGCCGTGTT CCGCACGCAG GAATCGCTCG AATCCGGCTG TCGGCGCCTG
TCGGCGATCT GGAAGGAACT GCCGGATATC AGGGTTACCG ACCGTTCGAT GATCTGGAAT
TCGGATCTCG TCGAGACGCT GGAGCTCGAA AACCTGATGG CCAATGCCAT CACCACGGTC
TACGGCGCCG AAGCGCGCAA GGAAAGCCGC GGCGCACATG CGCGCGAGGA CTATAAGGAC
GGCCCGCTCG GCGGCCGCGA TGACGTCAAC TGGCGCAAGC ATACGCTTGC CTGGGTCAAC
GACGCGGGCG ACGTCCGGCT CGATTTTCGT CCGGTTCACA CCGAGCTGAT CGCCGAAGGC
ATCGATCCTT ACAAGATCGA GCCCAAGGCC CGCGTCTACT GA
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| Protein sequence | MASISTPAAN GKAYKYVDHS FDVVVVGAGG AGLRATLGMA EQGLRTACIT KVFPTRSHTV
AAQGGIAASL QNMTPDCWQW HLYDTVKGSD WLGDVDAMQY LAMEAPKAVY ELEHYGVPFS
RNEEGKIYQR PFGGHMQNYG EGPPVQRTCA AADRTGHAIL HTLYGQSLRN NAEFFIEYFA
IDLIMSDDGR CTGVVAWNLD DGTIHRFAAK MVVLATGGYG RAYFSATSAH TCTGDGGGMI
ARAGLPLQDM EFVQFHPTGI YGAGCLITEG ARGEGGYLVN SEGERFMERY APSAKDLASR
DVVSRCMTME IREGRGVGKN KDHIFLHLDH LDPAVLHERL PGISESAKIF AGVDVTREPI
PVLPTVHYNM GGVPTNYWGE VLNADSQNPE RIAPGLMAVG EAGCASVHGA NRLGSNSLID
LVVFGRAAAI RAGQIIDRNA AVPEVDIAAC DRIMDRFDRL RHANGATPTA VLRDKMQRAM
QEDAAVFRTQ ESLESGCRRL SAIWKELPDI RVTDRSMIWN SDLVETLELE NLMANAITTV
YGAEARKESR GAHAREDYKD GPLGGRDDVN WRKHTLAWVN DAGDVRLDFR PVHTELIAEG
IDPYKIEPKA RVY
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