Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2944 |
Symbol | |
ID | 5323821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3092513 |
End bp | 3093475 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791895 |
Product | malate dehydrogenase |
Protein accession | YP_001328608 |
Protein GI | 150398141 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.533999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA ACAAGATCGC ACTTATCGGC TCGGGAATGA TTGGTGGCAC GCTGGCGCAT CTCGCCGGCC TGAAGGAACT GGGCGACATC GTCCTCTTTG ACATTGCCGA CGGCATTCCC CAGGGCAAGG GGCTCGACAT CGCTCAGTCC TCTCCGGTCG AGGGCTTCGA TGCCTCGCTC ACGGGTGCGA GCGACTATTC TGCGATCGAA GGCGCCGACG TCTGCATCGT CACGGCGGGC GTGCCGCGCA AGCCGGGCAT GAGCCGCGAC GATCTGCTCG GCATCAACCT CAAGGTCATG GAGCAGGTCG GCGCCGGCAT CAAGAAATAT GCTCCGAACG CCTTCGTCAT CTGCATCACC AACCCGCTCG ACGCGATGGT CTGGGCGTTG CAGAAATTCT CCGGGCTGCC GAAGAACAAG GTCGTCGGCA TGGCCGGCGT GCTCGATTCC TCGCGCTTCC GGCTCTTCCT TGCCGAGGAG TTCAACGTCT CGGTCAAGGA CATCACCGCT TTCGTGCTCG GCGGCCATGG CGATACCATG GTGCCGCTCG CCCGTTATTC GACCGTTGCC GGCATTCCGC TTCCCGATCT CATCCAGATG GGCTGGACCA CCAAGGAGAA GCTCGACCAG ATCATCCAGC GCACCCGCGA CGGCGGCGCC GAGATCGTCG GCCTGCTCAA GACCGGCTCG GCCTATTATG CCCCGGCCGC GTCCGCGATC GAAATGGCCG AAGCCTATCT CAAGGACAAG AAACGCGTGC TGCCCTGCGC GGCGCATCTT TCCGGACAGT ATGGCGTCAA GGAGATGTAT GTCGGCGTAC CGACCGTGAT CGGCGCCGGC GGCGTCGAAC GCATTATCGA AATCGACCTC AACAAGGGCG AGAAGGAAGC CTTCGACAAG TCGGTGGCGG CCGTGGCCGG CCTTTGCGAA GCCTGCATCA ACATCGCACC GAGCCTGAAG TAA
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Protein sequence | MARNKIALIG SGMIGGTLAH LAGLKELGDI VLFDIADGIP QGKGLDIAQS SPVEGFDASL TGASDYSAIE GADVCIVTAG VPRKPGMSRD DLLGINLKVM EQVGAGIKKY APNAFVICIT NPLDAMVWAL QKFSGLPKNK VVGMAGVLDS SRFRLFLAEE FNVSVKDITA FVLGGHGDTM VPLARYSTVA GIPLPDLIQM GWTTKEKLDQ IIQRTRDGGA EIVGLLKTGS AYYAPAASAI EMAEAYLKDK KRVLPCAAHL SGQYGVKEMY VGVPTVIGAG GVERIIEIDL NKGEKEAFDK SVAAVAGLCE ACINIAPSLK
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