Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2941 |
Symbol | sucA |
ID | 5323818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3087097 |
End bp | 3090093 |
Gene Length | 2997 bp |
Protein Length | 998 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791892 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | YP_001328605 |
Protein GI | 150398138 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.196108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGGC AAGAGGCCAA CGAGCAATTT CAGCTCACAT CCTTTCTGGA CGGCGCCAAT GCCGCCTATA TCGAGCAGCT CTATGCGCGC TATGAAGCAG ATCCCGGATC CGTTTCGGCC GAGTGGCAAT CCTTCTTCAA GGCGCTTGCC GAGCGGCCCG AAGATGTGGT GAGAGCGGCC AAGGGCGCCT CCTGGAAGAA GCCGAACTGG CCGATCCCCG CCAATGGCGA ACTCGTTTCG GCCCTCGACG GCGACTGGGG CACGGTCGAG AAGGTCATCG AAAAGAAGGT CAAGGCCAAG GCGGAGGAAG CCTCCGCCGC AACCGGCGTC CCGCTCAGCG AAGCCGAGGT GCATCAGTCG ACGCGCGATT CCGTCCGCGC CATCATGATG ATCCGCGCCT ATCGCATGCG CGGCCACCTG CATGCCAAGC TCGACCCGCT CGGCCTGGCC GATCCCGTCG AGGATTACGA CGAACTCTCC CCGAAGACCT ACGGCTTCGA AGAGAAGGAC TACGACCGCA AGATCTTCAT CGACAACGTG CTCGGCCTCG AATATGCGAC CGTGCGCGAG ATGGTCGAGC TGCTCGAGCG GACCTATTGT TCGACGATCG GCGTCGAATT CATGCATATC TCCAACCCGG AAGAGAAGGG CTGGATACAG GAACGCATCG AAGGTCCGGA CAAGGGCGTC GAATTCACCC CAGAGGGCAA GAAGGCGATC CTGCAGAAGC TCATCGAAGC GGAGGGCTTC GAGCAGTTCA TCGACGTCAA GTACAAGGGC ACCAAGCGTT TCGGCGTTGA TGGCGGCGAA TCCCTGATCC CCGCGCTCGA GCAGATCATC AAGCGCGGCG GCCAGCTCGG CCTGAAGGAG ATCGTCCTGG GTATGGCGCA TCGCGGCCGT CTCAACGTTC TCTCCCAGGT CATGGCCAAG CCGCACCGCG CCATCTTCCA CGAGTTCAAG GGCGGGTCCT ACACGCCCGA CGATGTGGAA GGCTCCGGCG ACGTCAAGTA TCACCTCGGC GCTTCCTCCG ACCGCGAATT CGACGGCAAC AAGGTCCACC TGTCGCTGAC CGCAAACCCG TCCCATCTCG AAATCGTCAA TCCGGTCGTC ATGGGCAAGG CGCGCGCCAA GCAGGATCAG ATGGCGACCG TATTCGAAGG CGACATCATA CCGCTGCGCG AACGCGTCAA GGTCATGCCG TTGATCCTGC ACGGCGACGC GGCCTTTGCC GGCCAGGGTG TGGTCGCCGA GATTCTCGGC CTATCGGGCC TGCGCGGGCA TCGTGTCGGC GGCACCGTCC ACTTCATCAT CAACAACCAG ATCGGCTTCA CCACGAACCC GGCCTTCTCC CGTTCCTCGC CCTATCCGTC CGACGTGGCG AAGATGATAG AAGCGCCCAT CTTCCACGTG AACGGCGACG ATCCGGAAGC GGTGGTCTAT GCCGCCAAGG TCGCGACCGA ATTCCGGATG AAGTTCCACA AGCCTGTCGT CATCGACATG TTCTGCTACC GGCGGTTCGG TCACAATGAG GGCGACGAGC CGGCCTTCAC GCAGCCGAGG ATGTACAAGG CCATCCGCTC GCACAAGACG GTCGTCCAGC TCTATTCGGA CCGGCTGATT GCCGAGGGCC TGATCAGCGA CGGCGAAGTC GAGAAGATGA AGGCCGACTG GCGCGCCCAT CTCGAACAGG AATTCGAGGC CGGCCAGTCC TACAAGCCGA ACAAGGCCGA CTGGCTCGAC GGTGCCTGGT CGGGTCTGCG CACGGCCGAC AACCAGGATG AGCAGCGGCG CGGGCGGACC TCGGTCCCTA TGAAGCAGCT GAAGGAAATC GGCCGTAAGC TTTCCGAAAT CCCGGACGGC TTCAGCGCGC ATCGCACCAT CCAGCGCTTC ATGGAGAACC GCGCCAACAT GGTCCAGACC GGCGAGGGCA TCGACTGGGC GATGGCGGAA GCGCTCGCCT TCGGTACGCT CGTGACGGAG GGCACCAAGA TTCGCCTTTC CGGCCAGGAT TGCGAGCGCG GCACCTTCTC GCAACGCCAT TCGGTTCTCT ACGATCAGGA GACCGAGGAG CGCTACATTC CGCTTGCCAA CCTGGCACCG ACGCAGGCTC GATACGAGGT CATCAACTCG ATGCTCTCCG AAGAGGCAGT GCTCGGCTTC GAGTACGGCT ATTCGCTCGC CCGCCCGAAC GCGCTGACAC TGTGGGAAGC CCAGTTCGGC GACTTCGCCA ATGGCGCACA GGTGGTTTTC GACCAGTTCG TCTCGTCGGG CGAGCGCAAG TGGCTGCGCA TGTCGGGTCT CGTCTGCCTG CTGCCGCACG GCTATGAGGG GCAGGGACCG GAGCATTCCT CCGCCCGCCT CGAGCGCTTC CTTCAGCTTT GCGCGGAAGA CAACATGCAG GTCGCCAACG TTACGACCCC GGCGAACTAC TTTCATATTC TGCGCCGGCA GGTAAAGCGC GACTTCCGCA AGCCGCTGAT CCTGATGACT CCGAAGTCGC TTCTGCGTCA CAAGAGGGCG GTCTCCAGCC TGTCGGAAAT GGCCGGCGAG AGCTCGTTCC ATCGTCTCCT TTGGGACGAT GCAGAGGTCA TCAAGGACGG GCCGATCAAG CTGCAGAAGG ATTCGAAGAT CCGCCGCGTG GTCCTGTGCT CGGGCAAGGT CTATTACGAT CTGCTGGAAG AGCGCGAGAA GCGCGGGATA GACGACATCT ACCTGCTGCG CGTCGAACAG CTCTATCCGT TCCCGGCAAA GGCGCTGATC AACGAACTCA GCCGCTTCCG CAATGCGGAG ATGGTCTGGT GCCAGGAAGA GCCGAAGAAC ATGGGCGCCT GGTCGTTCAT CGATCCCTAT CTAGAATGGG TACTTGCCCA TATCGATGCC AAGTACCAGC GGGTGCGCTA TACCGGCCGT CCTGCCGCCG CTTCGCCGGC TACCGGCCTG ATGTCCAAGC ATCTGGCGCA GCTTGCCGCC TTCCTCGAGG ACGCGCTGGG GGGCTGA
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Protein sequence | MTRQEANEQF QLTSFLDGAN AAYIEQLYAR YEADPGSVSA EWQSFFKALA ERPEDVVRAA KGASWKKPNW PIPANGELVS ALDGDWGTVE KVIEKKVKAK AEEASAATGV PLSEAEVHQS TRDSVRAIMM IRAYRMRGHL HAKLDPLGLA DPVEDYDELS PKTYGFEEKD YDRKIFIDNV LGLEYATVRE MVELLERTYC STIGVEFMHI SNPEEKGWIQ ERIEGPDKGV EFTPEGKKAI LQKLIEAEGF EQFIDVKYKG TKRFGVDGGE SLIPALEQII KRGGQLGLKE IVLGMAHRGR LNVLSQVMAK PHRAIFHEFK GGSYTPDDVE GSGDVKYHLG ASSDREFDGN KVHLSLTANP SHLEIVNPVV MGKARAKQDQ MATVFEGDII PLRERVKVMP LILHGDAAFA GQGVVAEILG LSGLRGHRVG GTVHFIINNQ IGFTTNPAFS RSSPYPSDVA KMIEAPIFHV NGDDPEAVVY AAKVATEFRM KFHKPVVIDM FCYRRFGHNE GDEPAFTQPR MYKAIRSHKT VVQLYSDRLI AEGLISDGEV EKMKADWRAH LEQEFEAGQS YKPNKADWLD GAWSGLRTAD NQDEQRRGRT SVPMKQLKEI GRKLSEIPDG FSAHRTIQRF MENRANMVQT GEGIDWAMAE ALAFGTLVTE GTKIRLSGQD CERGTFSQRH SVLYDQETEE RYIPLANLAP TQARYEVINS MLSEEAVLGF EYGYSLARPN ALTLWEAQFG DFANGAQVVF DQFVSSGERK WLRMSGLVCL LPHGYEGQGP EHSSARLERF LQLCAEDNMQ VANVTTPANY FHILRRQVKR DFRKPLILMT PKSLLRHKRA VSSLSEMAGE SSFHRLLWDD AEVIKDGPIK LQKDSKIRRV VLCSGKVYYD LLEEREKRGI DDIYLLRVEQ LYPFPAKALI NELSRFRNAE MVWCQEEPKN MGAWSFIDPY LEWVLAHIDA KYQRVRYTGR PAAASPATGL MSKHLAQLAA FLEDALGG
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