| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2940 |
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| Symbol | |
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| ID | 5323817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3085800 |
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| End bp | 3087047 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791891 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001328604 |
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| Protein GI | 150398137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.547955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAG AAATCCGCGT TCCCACTCTC GGCGAATCCG TCAGTGAAGC GACCGTCGGC
ACCTGGTTCA AGAAGGTTGG CGATGCGATC AAGGCAGACG AGCCGATCGT CGAGCTTGAA
ACCGACAAGG TGACGATCGA AGTTCCTGCA CCGGCAGCCG GCACGCTCAG CGAAATCGTT
GCCCAGGCGG GCGAGACGGT CGGGCTAGGT GCCCTTCTCG GCCAGATTGC CGAAGGCGCG
GGTGCAGCTG CCGCCGCTCC GGCTGCGGCC GAGAAAAAAC CCGAACCGGT TGCGGCTGCT
CCGGCTGCGG CCGCGCGGCC GCCCACTGCA GCCGCGCCGC AGACATCAAC GTCGATGCCG
CCGGCACCGG CATCCGCCAA GCTCATTGCC GAAAACAGCC TTTCCGCCGA TCAGATCGAC
GGCTCGGGTA AGCGCGGCCA GGTTCTGAAG GGCGACGTGC TCGCGGCCGT CGCCAAGGGC
ATTTCGGCCC CGGCTGCCGC CGAGCCGGCC CAGGTTCAGG CCCGCGCGCC GGCACCGGCT
GAAGACGCGG CTCGCGAGGA GCGCGTCAAG ATGACCCGCC TGCGCCAGAC GATTGCCCGT
CGCCTGAAGG ACGCGCAGAA CACGGCGGCG ATGCTTACCA CCTATAACGA GGTGGATATG
AGCGCCGTCA TGAGCCTGCG TTCAAAGTAC AAGGACATCT TCGAGAAGAA GCACGGCGTG
AAGCTCGGCT TCATGGGCTT CTTCACCAAG GCAGTGACCC ACGCGCTGAA GGAACTGCCG
GCTGTCAACG CCGAGATCGA CGGCACCGAG ATCATCTACA AGAATTTCTG CCATGTCGGC
GTCGCGGTCG GCACCGACAA GGGTCTCGTC GTGCCGGTCG TGCGTGACGC CGACCAGATG
TCGATCGCCG AAATCGAGAA GGAGATCGGC CGTCTCGGTA AGGCAGCGCG CGACGGCGCT
CTGTCCATGG CCGACATGCA GGGCGGCACC TTCACCATCT CCAACGGCGG TGTGTACGGC
TCACTGATGT CCTCGCCGAT CCTCAATGCT CCGCAATCGG GCATCCTCGG CATGCACAAG
ATCCAGGACC GCCCGGTCGC GATCGGTGGT CAGGTCGTCA TCCGGCCGAT GATGTATCTG
GCGCTGTCCT ACGATCACCG TATCGTCGAC GGCAAGGAAG CGGTGACCTT CCTCGTGCGC
GTCAAGGAAA GCCTCGAGGA TCCGGAACGC CTGGTACTCG ATCTCTAA
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| Protein sequence | MATEIRVPTL GESVSEATVG TWFKKVGDAI KADEPIVELE TDKVTIEVPA PAAGTLSEIV
AQAGETVGLG ALLGQIAEGA GAAAAAPAAA EKKPEPVAAA PAAAARPPTA AAPQTSTSMP
PAPASAKLIA ENSLSADQID GSGKRGQVLK GDVLAAVAKG ISAPAAAEPA QVQARAPAPA
EDAAREERVK MTRLRQTIAR RLKDAQNTAA MLTTYNEVDM SAVMSLRSKY KDIFEKKHGV
KLGFMGFFTK AVTHALKELP AVNAEIDGTE IIYKNFCHVG VAVGTDKGLV VPVVRDADQM
SIAEIEKEIG RLGKAARDGA LSMADMQGGT FTISNGGVYG SLMSSPILNA PQSGILGMHK
IQDRPVAIGG QVVIRPMMYL ALSYDHRIVD GKEAVTFLVR VKESLEDPER LVLDL
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