Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2937 |
Symbol | |
ID | 5323814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3083742 |
End bp | 3084494 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640791888 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001328601 |
Protein GI | 150398134 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.75761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACG GACCTGTGCT TCTCGTCACC GGGGGCAGCC GCGGCATCGG CGCCGCGATT GCGCTTGCCG CGGCCAGCGA GGGTTGGAGG GTCGCGGTCA ACTACGCGTC CAATCGCAAC GCGGCCGAAG AGGTGGTCCG ACGCATTTTG CAAGCTGGGG GCACAGCCGT TTCCGTCGAA GGCGACGTGG GCAGGGAAGA GGGGGTCAAG GCGATCTTTG CCGCCGTCGA CTCCGTCTTC GGCCGTCTCG ACGGTCTCGT CAACAATGCC GGCATTATCG GCCCGCCGCA GCGCGTGGAC GAGATTTCGC CTGAGCGAAT CGAGCGGCTT TTCCGCATCA ATGTGACCGG CTCCATCCGT TGCGCCGCCG AGGCGGTGCT CCGGATGTCG ACGCGTCACG GCGGGCGGGG GGGCTCGATC GTCAATCTCT CCTCCATCGC TGCCGTGCTT GGCGCGCCCG GGCAATATGT CGACTACGCA GCCACGAAGG GCGCGATCGA CAGCTTCACC GTCGGACTGG CGCGTGAAAC CGCCACCGAG GGCATACGCG TGAACGCGGT CCGGCCCGGC GTCATCGACA CGGAAATCCA TGCCTCCGGC GGGCTGCCCG ACCGCGCCCG CGACCTCGCG CCAACGATCC CGATGCAGCG TCCCGGAACG GCCGGCGAGG TTGCCGACGC AATTCTCTAT CTCCTGTCCG ACAAGGCAAC GTATGTCACG GGAACCATTC TCACGGTCAG CGGCGGGCGG TAG
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Protein sequence | MSNGPVLLVT GGSRGIGAAI ALAAASEGWR VAVNYASNRN AAEEVVRRIL QAGGTAVSVE GDVGREEGVK AIFAAVDSVF GRLDGLVNNA GIIGPPQRVD EISPERIERL FRINVTGSIR CAAEAVLRMS TRHGGRGGSI VNLSSIAAVL GAPGQYVDYA ATKGAIDSFT VGLARETATE GIRVNAVRPG VIDTEIHASG GLPDRARDLA PTIPMQRPGT AGEVADAILY LLSDKATYVT GTILTVSGGR
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