| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2925 |
|---|
| Symbol | |
|---|
| ID | 5323802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 3070019 |
|---|
| End bp | 3070585 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640791876 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_001328589 |
|---|
| Protein GI | 150398122 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTGG CAGACACATC CCAGCTCATT TCCGGTGTTG CAGAAAGATA TGCCTCCTCG
CTTTTCGAGC TTGCTCTGGA AGCCGGATCG ATCGAAGCGG TCGGTGCCGA CCTGACGCGC
ATCCAGGCTC TGATCGACGG CAGCGCGGAT CTGAAGCGAC TGATCGTAAG CCCGGTCTTT
TCTGCCGACG ACCAGTACAA GGCAATTTCG GCCCTCGTCG AGAAGTTCGG CGTCTCCGGG
CTGGTGGGCA ACTTCCTCAA AGTCGTCGCG CGCAACCGCC GTCTCTTCGT GCTGCCGGGC
ATCATCAGGG CATTTCGTCT GCTCGCTGCC CGCCACAAGG GCGAAATCAC TGCCGACGTG
ACGTCGGCGC ATGCGCTGAC CCCGGCGCAG GAAACCGAAT TGAAGGCGGC GCTGAAAGGC
GTCACCGGCA AAGACGTGGC GGTAAACGTC ACTGTCGACC CGTCTATTCT TGGAGGTCTG
ATCGTCAAGG TCGGTTCCCG CCAGATTGAC ACCTCCCTTC GCACCAAACT CTCTACCCTT
AAGCTTGCAC TGAAAGAGGT CGGCTGA
|
|---|
| Protein sequence | MPVADTSQLI SGVAERYASS LFELALEAGS IEAVGADLTR IQALIDGSAD LKRLIVSPVF
SADDQYKAIS ALVEKFGVSG LVGNFLKVVA RNRRLFVLPG IIRAFRLLAA RHKGEITADV
TSAHALTPAQ ETELKAALKG VTGKDVAVNV TVDPSILGGL IVKVGSRQID TSLRTKLSTL
KLALKEVG
|
|---|
| |