Gene Smed_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2923 
Symbol 
ID5323800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3067587 
End bp3068462 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID640791874 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001328587 
Protein GI150398120 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAC TTAAGGATCT GAAGAACCGG ATCGCCTCCG TCAAGGCGAC GCAGAAGATC 
ACCAAGGCGA TGAAGATGGT CGCCGCGGCG AAGCTTCGGC GTGCCCAGGA GGCGGCCGAG
GCCGCCCGGC CTTATTCGCA GCGCATGGCT GCCGTTCTCT CCAATATCGC CCAGGCGGTC
GGTGCGGACG ACAGCGCGCC GCGGCTGATG ACGGGCACCG GCAAGGACGA CACGCATCTG
CTGGTAGTCT GCACAGCCGA GCGCGGCCTT TGCGGCGGTT TCAATTCGCA GATCGCCCGC
CATGCCCGCG ACCACGTACG CAAGCTCCTG GCCCAGGGCA AGACGGTCAA GATCATTTGC
GTCGGCAAGA AGGGCTTCGA TATTCTTCGG CGCGAGTTCG CGTCGCTGAT CATCGACCGG
GTTGACCTGC GCGAAGTGAA GAAGATCGGT TTCGAGAACG CGGACCGGAT CGGCCACAAG
GTCATCGAGC TCTTCGACAA TGGCGAGTTC GACGTCTGCA CTCTGTTCTA TTCCGAGTTC
AAGTCCGTCA TTTCTCAGAT CCCGACGGCC CAGCAGCTCA TTCCAGCATC GGCCGGCGAA
GCCGTTGCCG AGGGTGCTTC GGCGATCTAC GAATATGAGC CGGACGCCGC GGCGATCCTG
AGCGATCTCA TTCCACGCAA TATCTCCGTG CAGATCTTCC GGGCCCTGCT CGAGAACGTC
GCCGGCGAAA TGGGCGCGAA GATGAGTGCC ATGGACAATG CGACGCGCAA TGCGGGTGAG
ATGATCAACA AGCTGACGCT CAACTACAAC CGTCAGCGGC AGGCGCAGAT CACCAAGGAA
CTCATTGAAA TCATCTCTGG CGCGGAAGCG CTCTAA
 
Protein sequence
MPSLKDLKNR IASVKATQKI TKAMKMVAAA KLRRAQEAAE AARPYSQRMA AVLSNIAQAV 
GADDSAPRLM TGTGKDDTHL LVVCTAERGL CGGFNSQIAR HARDHVRKLL AQGKTVKIIC
VGKKGFDILR REFASLIIDR VDLREVKKIG FENADRIGHK VIELFDNGEF DVCTLFYSEF
KSVISQIPTA QQLIPASAGE AVAEGASAIY EYEPDAAAIL SDLIPRNISV QIFRALLENV
AGEMGAKMSA MDNATRNAGE MINKLTLNYN RQRQAQITKE LIEIISGAEA L